Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 TBC1D3P1-DHX40P1-201ENST00000587125 1841 ntTSL 2 BASIC8.02□□□□□ -1.13
HLA-CQ95604 RNU4-81P-201ENST00000363561 144 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 RNU6-185P-201ENST00000384421 107 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 RNU6-1160P-201ENST00000384546 104 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 RNU1-56P-201ENST00000391303 164 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AL033519.1-201ENST00000407266 307 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 RN7SKP32-201ENST00000410167 303 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 RN7SKP148-201ENST00000410179 275 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 Y_RNA.608-201ENST00000410647 95 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 RNU6-373P-201ENST00000411247 98 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AC073335.1-201ENST00000427776 363 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AL121776.1-201ENST00000429337 372 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AC018644.1-201ENST00000429934 551 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AC093716.1-201ENST00000435923 377 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC8.02□□□□□ -1.13
HLA-CQ95604 ST13P21-201ENST00000453250 1098 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 RPS16P9-201ENST00000477220 427 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 RN7SL502P-201ENST00000481857 290 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AC073610.1-201ENST00000489971 396 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AC111193.1-201ENST00000504097 155 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 RNA5SP473-201ENST00000516402 125 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AC243972.3-201ENST00000539655 198 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 PRR13P5-201ENST00000596581 442 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AC005387.1-201ENST00000597837 352 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 BNIP3P23-201ENST00000599655 511 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AC007621.1-201ENST00000604544 437 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AL359091.2-201ENST00000609303 556 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 AL603758.1-201ENST00000618654 241 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 TSHZ2-205ENST00000626626 670 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AC183089.2-201ENST00000637931 916 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 MIR1302-1-201ENST00000637932 143 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 RASSF6-201ENST00000307439 5994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 DLG1-208ENST00000419354 3994 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 ATP5A1P10-201ENST00000622403 1603 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 OR6M2P-202ENST00000641780 2063 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 USP16-204ENST00000399976 2963 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 ENPP6-201ENST00000296741 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 PPP2R2A-202ENST00000380737 3940 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 LRRC4C-204ENST00000530763 2669 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC8.02□□□□□ -1.13
HLA-CQ95604 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.02□□□□□ -1.13
HLA-CQ95604 AL353795.1-201ENST00000439134 1775 ntBASIC8.02□□□□□ -1.13
HLA-CQ95604 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.02□□□□□ -1.13
HLA-CQ95604 OR2T10-202ENST00000642090 3519 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
HLA-CQ95604 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
HLA-CQ95604 AL137145.2-201ENST00000399868 3086 ntTSL 2 BASIC8.01□□□□□ -1.13
HLA-CQ95604 ATP8A2P2-201ENST00000437678 1568 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-CQ95604 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 ZMIZ1-AS1-201ENST00000428862 2851 ntTSL 5 BASIC8.01□□□□□ -1.13
HLA-CQ95604 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 DPF3-203ENST00000541685 4077 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC8.01□□□□□ -1.13
HLA-CQ95604 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
HLA-CQ95604 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 AGBL4-204ENST00000371839 2947 ntAPPRIS P2 TSL 2 BASIC8.01□□□□□ -1.13
HLA-CQ95604 AC090771.1-201ENST00000585803 1618 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC8.01□□□□□ -1.13
HLA-CQ95604 OR4A15-201ENST00000314706 1035 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
HLA-CQ95604 FAM32BP-201ENST00000344033 333 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
HLA-CQ95604 RNU6-254P-201ENST00000363377 107 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 RNU6-533P-201ENST00000384144 107 ntBASIC8.01□□□□□ -1.13
HLA-CQ95604 Y_RNA.474-201ENST00000384341 102 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms