Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC096996.1-201ENST00000563813 325 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 MIR4472-2-201ENST00000582069 67 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC090607.5-201ENST00000615692 224 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 BNIP3P41-202ENST00000616656 861 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AC068870.1-201ENST00000563737 2455 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 RNU6-673P-201ENST00000365084 104 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 SETP15-201ENST00000412724 337 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 MGAT2P2-201ENST00000427194 797 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AC118758.1-202ENST00000454719 225 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 RPL32P33-201ENST00000487023 394 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AGGF1P7-201ENST00000562369 913 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AP005262.1-201ENST00000582646 997 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 AC144833.1-201ENST00000567953 4089 ntBASIC5.93□□□□□ -1.46
CCDC50Q8IVM0 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 HSPD1P7-201ENST00000447985 1686 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AC104260.2-201ENST00000623551 3497 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 NPM1P40-201ENST00000412758 733 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 RPS6P23-201ENST00000413224 722 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AL117692.1-201ENST00000494283 713 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 IGLV3-24-201ENST00000517477 197 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AC011853.1-201ENST00000518911 454 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AL356801.1-201ENST00000559320 294 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AC006272.2-201ENST00000594725 163 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AC073592.6-201ENST00000624271 415 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 AC112198.2-201ENST00000426589 6996 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 OR4F13P-202ENST00000560066 2054 ntBASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
CCDC50Q8IVM0 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC50Q8IVM0 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC50Q8IVM0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC50Q8IVM0 AC007938.2-201ENST00000604666 2634 ntBASIC5.91□□□□□ -1.46
CCDC50Q8IVM0 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC50Q8IVM0 RNA5SP500-201ENST00000364486 119 ntBASIC5.91□□□□□ -1.46
CCDC50Q8IVM0 U3.28-201ENST00000391249 210 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms