Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PTCHD4Q6ZW05 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.68□□□□□ -1.5
PTCHD4Q6ZW05 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.68□□□□□ -1.5
PTCHD4Q6ZW05 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTCHD4Q6ZW05 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.68□□□□□ -1.5
PTCHD4Q6ZW05 MTCO1P15-201ENST00000529569 1526 ntBASIC5.68□□□□□ -1.5
PTCHD4Q6ZW05 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.68□□□□□ -1.5
PTCHD4Q6ZW05 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.68□□□□□ -1.5
PTCHD4Q6ZW05 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTCHD4Q6ZW05 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AL137141.1-201ENST00000624622 4836 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 RNU1-84P-201ENST00000365447 164 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 RNU11-201ENST00000387069 134 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 ZNF602P-201ENST00000405929 924 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 RN7SKP17-201ENST00000411242 351 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC009506.2-201ENST00000420635 840 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AL160175.1-201ENST00000428124 247 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 MTCO1P43-201ENST00000431831 488 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AL731534.1-201ENST00000434711 269 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC092447.2-201ENST00000435487 669 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 FABP5P3-201ENST00000437960 408 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 EIF3LP2-201ENST00000457262 807 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC073594.1-201ENST00000462065 364 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 MTCO2P6-201ENST00000463134 685 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC020779.1-201ENST00000478757 796 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC010374.1-201ENST00000503762 1237 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC018645.1-201ENST00000505003 109 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 HAUS1P3-201ENST00000523909 662 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 OR8K4P-201ENST00000534608 872 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC023080.1-201ENST00000551663 931 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 NPM1P42-201ENST00000560329 862 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC104229.1-201ENST00000561364 255 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AL359715.3-201ENST00000569267 2123 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 RN7SL657P-201ENST00000582431 293 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC027229.1-201ENST00000583887 253 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AL589863.1-201ENST00000595383 631 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AL360012.1-201ENST00000602813 131 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 MIR7159-201ENST00000620587 66 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 CU459211.1-201ENST00000635667 749 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC006927.2-201ENST00000639256 389 ntBASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTCHD4Q6ZW05 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 PCF11-AS1-201ENST00000602322 1516 ntBASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 AC010132.2-201ENST00000295493 1043 ntBASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 RNU6-252P-201ENST00000363232 107 ntBASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PTCHD4Q6ZW05 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms