Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC135803.1-201ENST00000608748 565 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AL031658.2-201ENST00000616850 651 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC073592.6-201ENST00000624271 415 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AC097372.4-201ENST00000625025 466 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 AP001052.1-201ENST00000626421 99 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 OFD1P17-201ENST00000437639 3018 ntBASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
ZNF549Q6P9A3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC232271.1-201ENST00000602455 2715 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 WDR95P-201ENST00000425638 1542 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 RNU1-136P-201ENST00000384181 164 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 RNU6-883P-201ENST00000384597 107 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 RPL24P2-201ENST00000421023 475 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC019205.1-201ENST00000421830 730 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC069154.1-201ENST00000432914 542 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 MTND2P2-201ENST00000434633 945 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 PCBP2P1-201ENST00000437262 977 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 EIF5AP4-201ENST00000441206 465 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 OR7E116P-201ENST00000448529 957 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 RPS23P9-201ENST00000448848 438 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC099521.1-201ENST00000482557 334 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 GAPDHP71-201ENST00000511530 1003 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC021146.10-201ENST00000515628 706 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC068305.2-201ENST00000550567 1205 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC022387.2-201ENST00000604050 448 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 AC020763.5-201ENST00000623298 430 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 CAP1P2-201ENST00000417455 1409 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 OR51C1P-202ENST00000641159 1444 ntBASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.7□□□□□ -1.5
ZNF549Q6P9A3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 MTCO1P4-201ENST00000520516 1409 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 MIR130A-201ENST00000385274 89 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC087752.1-201ENST00000391360 558 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC004386.1-201ENST00000393214 761 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 RPL11P3-201ENST00000395256 523 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 UBE2V1P15-201ENST00000407776 448 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 VN1R21P-201ENST00000426703 765 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 OR52E7P-201ENST00000452394 933 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 EIF2S2P4-201ENST00000461070 984 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 RN7SL168P-201ENST00000463821 279 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 RPS7P6-201ENST00000485777 579 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 RN7SL284P-201ENST00000498823 275 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms