Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.27□□□□□ -1.89
HSPG2P98160 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
HSPG2P98160 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HSPG2P98160 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC3.27□□□□□ -1.89
HSPG2P98160 PARP4P1-201ENST00000435945 2337 ntBASIC3.27□□□□□ -1.89
HSPG2P98160 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC3.26□□□□□ -1.89
HSPG2P98160 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
HSPG2P98160 RNU1-64P-201ENST00000365443 163 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 AC008171.1-201ENST00000395058 200 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 CYP2AC1P-201ENST00000407830 1173 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 RPL7P32-201ENST00000457119 744 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 CR383656.1-201ENST00000484916 377 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.26□□□□□ -1.89
HSPG2P98160 AC023818.1-201ENST00000498379 384 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.26□□□□□ -1.89
HSPG2P98160 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC3.26□□□□□ -1.89
HSPG2P98160 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 CECR2-206ENST00000612582 9645 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 RRP8-201ENST00000254605 6560 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HSPG2P98160 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HSPG2P98160 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 OFD1P8Y-201ENST00000449148 1433 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 ZNF592-203ENST00000560079 8131 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC3.26□□□□□ -1.89
HSPG2P98160 GAPDHP49-201ENST00000421421 961 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC3.26□□□□□ -1.89
HSPG2P98160 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.26□□□□□ -1.89
HSPG2P98160 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC3.26□□□□□ -1.89
HSPG2P98160 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.26□□□□□ -1.89
HSPG2P98160 AC138701.1-201ENST00000524329 714 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 AP000889.1-201ENST00000530968 660 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.26□□□□□ -1.89
HSPG2P98160 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 SDAD1P1-202ENST00000524156 2051 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC3.26□□□□□ -1.89
HSPG2P98160 SNORD113.2-201ENST00000364166 89 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 RSU1P3-201ENST00000412878 835 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 RPL12P17-201ENST00000432393 498 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.26□□□□□ -1.89
HSPG2P98160 YWHABP1-201ENST00000445359 727 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.26□□□□□ -1.89
HSPG2P98160 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 GAPDHP56-201ENST00000506031 988 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 AC004232.3-201ENST00000622977 525 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC3.26□□□□□ -1.89
HSPG2P98160 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 COL6A4P1-202ENST00000487147 4317 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 COL12A1-211ENST00000615798 11579 ntTSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 AC100757.1-201ENST00000616872 1835 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 MAP1A-202ENST00000382031 10553 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HSPG2P98160 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HSPG2P98160 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.26□□□□□ -1.89
HSPG2P98160 FTH1P25-201ENST00000447665 469 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 GTF2F2P1-201ENST00000511083 675 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 IGKV2-23-201ENST00000518729 323 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC3.26□□□□□ -1.89
HSPG2P98160 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
HSPG2P98160 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC3.26□□□□□ -1.89
HSPG2P98160 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.26□□□□□ -1.89
HSPG2P98160 AP005119.2-201ENST00000579735 1105 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 VN1R85P-201ENST00000601587 426 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 AC006133.1-201ENST00000617106 264 ntBASIC3.26□□□□□ -1.89
HSPG2P98160 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HSPG2P98160 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.25□□□□□ -1.89
HSPG2P98160 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 SELE-204ENST00000367776 3576 ntTSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 SELE-205ENST00000367777 3576 ntTSL 5 BASIC3.25□□□□□ -1.89
HSPG2P98160 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HSPG2P98160 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC3.25□□□□□ -1.89
HSPG2P98160 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms