Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 BX119321.1-201ENST00000428912 797 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 NANOGP9-201ENST00000439890 892 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.04□□□□□ -1.6
H3F3AP84243 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3AP84243 RPS27AP2-201ENST00000457576 465 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 ATP5LP5-201ENST00000483050 299 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3AP84243 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.04□□□□□ -1.6
H3F3AP84243 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3AP84243 AC019322.1-201ENST00000571869 389 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 AC016839.1-201ENST00000578162 867 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.04□□□□□ -1.6
H3F3AP84243 MIR4310-201ENST00000582950 57 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.04□□□□□ -1.6
H3F3AP84243 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.04□□□□□ -1.6
H3F3AP84243 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.04□□□□□ -1.6
H3F3AP84243 AC015712.7-201ENST00000615211 635 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3AP84243 AC127024.6-201ENST00000621598 424 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 CU639417.4-201ENST00000623928 207 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3AP84243 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3AP84243 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3AP84243 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3AP84243 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.04□□□□□ -1.6
H3F3AP84243 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
H3F3AP84243 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.04□□□□□ -1.6
H3F3AP84243 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.04□□□□□ -1.6
H3F3AP84243 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3AP84243 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3AP84243 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.04□□□□□ -1.6
H3F3AP84243 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
H3F3AP84243 TCP11X1-202ENST00000622971 1372 ntBASIC5.04□□□□□ -1.6
H3F3AP84243 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.03□□□□□ -1.6
H3F3AP84243 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.03□□□□□ -1.6
H3F3AP84243 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
H3F3AP84243 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.03□□□□□ -1.6
H3F3AP84243 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 AC087752.1-201ENST00000391360 558 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
H3F3AP84243 GAPDHP42-201ENST00000406848 981 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.03□□□□□ -1.6
H3F3AP84243 RPS6P23-201ENST00000413224 722 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AL596448.1-201ENST00000415024 392 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.03□□□□□ -1.6
H3F3AP84243 AC104843.2-201ENST00000427666 297 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AC006335.2-201ENST00000437993 330 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AC002504.1-201ENST00000438281 691 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AC064862.4-201ENST00000442180 334 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AL450996.1-201ENST00000445574 1202 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
H3F3AP84243 RPL31P15-201ENST00000449770 338 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.03□□□□□ -1.6
H3F3AP84243 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.03□□□□□ -1.6
H3F3AP84243 RN7SL273P-201ENST00000481561 299 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 PPIAP19-201ENST00000486414 492 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 RPS17P5-201ENST00000498293 408 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.03□□□□□ -1.6
H3F3AP84243 AC138866.2-201ENST00000508650 584 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.03□□□□□ -1.6
H3F3AP84243 NRBF2P4-201ENST00000520874 850 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.03□□□□□ -1.6
H3F3AP84243 PMS2P3-207ENST00000529061 717 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AC084824.2-201ENST00000548906 345 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.03□□□□□ -1.6
H3F3AP84243 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.03□□□□□ -1.6
H3F3AP84243 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 AL390318.1-201ENST00000624564 687 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.03□□□□□ -1.6
H3F3AP84243 AC012078.1-201ENST00000405035 1646 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.03□□□□□ -1.6
H3F3AP84243 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.03□□□□□ -1.6
H3F3AP84243 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
H3F3AP84243 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.03□□□□□ -1.6
H3F3AP84243 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 ADAM24P-201ENST00000398655 2101 ntBASIC5.03□□□□□ -1.6
H3F3AP84243 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.03□□□□□ -1.6
H3F3AP84243 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.03□□□□□ -1.6
H3F3AP84243 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
H3F3AP84243 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
H3F3AP84243 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
H3F3AP84243 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.61
H3F3AP84243 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
H3F3AP84243 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.02□□□□□ -1.61
H3F3AP84243 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
H3F3AP84243 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
H3F3AP84243 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms