Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.68□□□□□ -1.5
RAE1P78406 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.68□□□□□ -1.5
RAE1P78406 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.68□□□□□ -1.5
RAE1P78406 AC087894.1-201ENST00000538359 518 ntBASIC5.68□□□□□ -1.5
RAE1P78406 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC5.68□□□□□ -1.5
RAE1P78406 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.68□□□□□ -1.5
RAE1P78406 AC121758.1-202ENST00000556917 658 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC007346.1-201ENST00000569208 867 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC124283.4-201ENST00000581815 456 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC008507.2-201ENST00000588402 1176 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AP001267.4-201ENST00000602598 545 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC005034.4-201ENST00000603612 899 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC069431.2-201ENST00000604149 1099 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC084824.4-201ENST00000620106 731 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC015722.2-201ENST00000622210 551 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC126544.2-201ENST00000625174 749 ntBASIC5.68□□□□□ -1.5
RAE1P78406 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.68□□□□□ -1.5
RAE1P78406 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
RAE1P78406 OR6C71P-202ENST00000641886 1107 ntBASIC5.68□□□□□ -1.5
RAE1P78406 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 AC132825.1-201ENST00000463573 2247 ntBASIC5.68□□□□□ -1.5
RAE1P78406 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RAE1P78406 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RAE1P78406 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAE1P78406 PSG10P-201ENST00000501199 1500 ntBASIC5.68□□□□□ -1.5
RAE1P78406 AC092070.2-203ENST00000598377 3644 ntBASIC5.68□□□□□ -1.5
RAE1P78406 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.68□□□□□ -1.5
RAE1P78406 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 SNX18P3-202ENST00000565670 1750 ntBASIC5.67□□□□□ -1.5
RAE1P78406 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
RAE1P78406 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
RAE1P78406 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.67□□□□□ -1.5
RAE1P78406 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 RN7SKP28-201ENST00000364770 305 ntBASIC5.67□□□□□ -1.5
RAE1P78406 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RAE1P78406 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.67□□□□□ -1.5
RAE1P78406 TATDN1P1-201ENST00000414123 891 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.67□□□□□ -1.5
RAE1P78406 AL158827.1-201ENST00000416300 391 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.67□□□□□ -1.5
RAE1P78406 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.67□□□□□ -1.5
RAE1P78406 AL139158.1-201ENST00000424719 340 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 AL590399.2-201ENST00000427536 309 ntBASIC5.67□□□□□ -1.5
RAE1P78406 BX119904.1-201ENST00000432026 348 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AL353662.1-201ENST00000439099 327 ntBASIC5.67□□□□□ -1.5
RAE1P78406 RPS7P3-201ENST00000443360 580 ntBASIC5.67□□□□□ -1.5
RAE1P78406 RPL6P30-201ENST00000443382 862 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 AL603882.1-201ENST00000463059 681 ntBASIC5.67□□□□□ -1.5
RAE1P78406 RPSAP39-201ENST00000467439 883 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC044810.1-201ENST00000480271 711 ntBASIC5.67□□□□□ -1.5
RAE1P78406 RPS3AP6-201ENST00000484430 795 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC083795.1-201ENST00000491760 320 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.67□□□□□ -1.5
RAE1P78406 AC111000.6-201ENST00000514471 709 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 AC139697.1-201ENST00000548429 745 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 AC009712.1-201ENST00000564938 316 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.67□□□□□ -1.5
RAE1P78406 RN7SL230P-201ENST00000580835 303 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.67□□□□□ -1.5
RAE1P78406 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 AC011492.1-201ENST00000600023 315 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.67□□□□□ -1.5
RAE1P78406 AC006946.3-201ENST00000609791 756 ntBASIC5.67□□□□□ -1.5
RAE1P78406 RNU6-1192P-201ENST00000612197 107 ntBASIC5.67□□□□□ -1.5
RAE1P78406 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.67□□□□□ -1.5
RAE1P78406 AC078880.5-201ENST00000617845 421 ntBASIC5.67□□□□□ -1.5
RAE1P78406 RNU6-489P-201ENST00000618289 107 ntBASIC5.67□□□□□ -1.5
RAE1P78406 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
RAE1P78406 MTCO1P28-201ENST00000574177 1528 ntBASIC5.67□□□□□ -1.5
RAE1P78406 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.67□□□□□ -1.5
RAE1P78406 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 KYNUP3-201ENST00000574386 1341 ntBASIC5.67□□□□□ -1.5
RAE1P78406 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RAE1P78406 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RAE1P78406 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAE1P78406 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms