Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.94□□□□□ -1.62
UBA52P62987 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.94□□□□□ -1.62
UBA52P62987 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UBA52P62987 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.94□□□□□ -1.62
UBA52P62987 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC4.94□□□□□ -1.62
UBA52P62987 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.94□□□□□ -1.62
UBA52P62987 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC4.94□□□□□ -1.62
UBA52P62987 LSM3P2-201ENST00000551246 273 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AC135626.1-201ENST00000556983 435 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.94□□□□□ -1.62
UBA52P62987 AC007225.2-201ENST00000562529 256 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AC007346.2-201ENST00000564816 892 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AP005119.1-201ENST00000580956 292 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.94□□□□□ -1.62
UBA52P62987 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.94□□□□□ -1.62
UBA52P62987 AL591167.1-201ENST00000607321 456 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AC004477.3-201ENST00000614061 590 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AL355974.3-201ENST00000617383 467 ntBASIC4.94□□□□□ -1.62
UBA52P62987 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.94□□□□□ -1.62
UBA52P62987 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UBA52P62987 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UBA52P62987 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
UBA52P62987 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.94□□□□□ -1.62
UBA52P62987 THAP12P9-201ENST00000503971 2360 ntBASIC4.94□□□□□ -1.62
UBA52P62987 AF287957.1-201ENST00000607368 1595 ntBASIC4.94□□□□□ -1.62
UBA52P62987 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
UBA52P62987 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
UBA52P62987 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 PSG10P-201ENST00000501199 1500 ntBASIC4.93□□□□□ -1.62
UBA52P62987 CR788268.1-201ENST00000603931 1809 ntBASIC4.93□□□□□ -1.62
UBA52P62987 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
UBA52P62987 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.93□□□□□ -1.62
UBA52P62987 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 U3.25-201ENST00000391209 220 ntBASIC4.93□□□□□ -1.62
UBA52P62987 MIR1203-201ENST00000408812 85 ntBASIC4.93□□□□□ -1.62
UBA52P62987 RN7SKP166-201ENST00000410812 305 ntBASIC4.93□□□□□ -1.62
UBA52P62987 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.93□□□□□ -1.62
UBA52P62987 AC009784.1-201ENST00000426484 460 ntBASIC4.93□□□□□ -1.62
UBA52P62987 CRIP1P1-201ENST00000427567 185 ntBASIC4.93□□□□□ -1.62
UBA52P62987 PCBP2P1-201ENST00000437262 977 ntBASIC4.93□□□□□ -1.62
UBA52P62987 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.93□□□□□ -1.62
UBA52P62987 TRIM60P16-201ENST00000444048 694 ntBASIC4.93□□□□□ -1.62
UBA52P62987 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.93□□□□□ -1.62
UBA52P62987 RPL23AP60-201ENST00000450011 454 ntBASIC4.93□□□□□ -1.62
UBA52P62987 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.93□□□□□ -1.62
UBA52P62987 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 RPSAP39-201ENST00000467439 883 ntBASIC4.93□□□□□ -1.62
UBA52P62987 RN7SL629P-201ENST00000489622 285 ntBASIC4.93□□□□□ -1.62
UBA52P62987 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 USP9YP2-201ENST00000504503 1000 ntBASIC4.93□□□□□ -1.62
UBA52P62987 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 USP9YP1-201ENST00000513521 1002 ntBASIC4.93□□□□□ -1.62
UBA52P62987 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.93□□□□□ -1.62
UBA52P62987 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.93□□□□□ -1.62
UBA52P62987 AC078899.1-201ENST00000521432 1185 ntBASIC4.93□□□□□ -1.62
UBA52P62987 WBP1LP3-201ENST00000523033 208 ntBASIC4.93□□□□□ -1.62
UBA52P62987 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
UBA52P62987 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.93□□□□□ -1.62
UBA52P62987 STARD6-202ENST00000577499 696 ntTSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 AC016839.1-201ENST00000578162 867 ntBASIC4.93□□□□□ -1.62
UBA52P62987 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 AC005244.1-201ENST00000582566 339 ntBASIC4.93□□□□□ -1.62
UBA52P62987 COX6CP7-201ENST00000597056 208 ntBASIC4.93□□□□□ -1.62
UBA52P62987 AL513327.3-201ENST00000602618 469 ntBASIC4.93□□□□□ -1.62
UBA52P62987 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
UBA52P62987 AL136228.1-201ENST00000622221 319 ntBASIC4.93□□□□□ -1.62
UBA52P62987 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.93□□□□□ -1.62
UBA52P62987 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 TCP1P3-201ENST00000414406 1498 ntBASIC4.93□□□□□ -1.62
UBA52P62987 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.93□□□□□ -1.62
UBA52P62987 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
UBA52P62987 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBA52P62987 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
UBA52P62987 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UBA52P62987 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBA52P62987 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBA52P62987 AC106872.5-201ENST00000508856 1416 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms