Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC00556-201ENST00000569603 412 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 AC063977.5-201ENST00000601044 974 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.45□□□□□ -1.54
PKNOX1P55347 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.45□□□□□ -1.54
PKNOX1P55347 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PKNOX1P55347 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PKNOX1P55347 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.45□□□□□ -1.54
PKNOX1P55347 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PKNOX1P55347 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
PKNOX1P55347 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PKNOX1P55347 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PKNOX1P55347 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PKNOX1P55347 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PKNOX1P55347 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.44□□□□□ -1.54
PKNOX1P55347 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
PKNOX1P55347 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PKNOX1P55347 MTCO1P7-201ENST00000419523 1542 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PKNOX1P55347 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.44□□□□□ -1.54
PKNOX1P55347 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.44□□□□□ -1.54
PKNOX1P55347 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PKNOX1P55347 RNA5SP477-201ENST00000362639 119 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.44□□□□□ -1.54
PKNOX1P55347 MIR1203-201ENST00000408812 85 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.44□□□□□ -1.54
PKNOX1P55347 SMC4P1-201ENST00000414479 527 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AL035660.1-201ENST00000422041 222 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AL136231.1-201ENST00000429407 730 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 RPL7P56-201ENST00000429441 717 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AC068491.1-201ENST00000449539 1241 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AZGP1P2-201ENST00000454506 345 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AC118758.1-202ENST00000454719 225 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 RPSAP37-201ENST00000470913 821 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AC022215.1-201ENST00000481770 362 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 RPS3AP15-201ENST00000483874 781 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 NENFP3-201ENST00000503735 313 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.44□□□□□ -1.54
PKNOX1P55347 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PKNOX1P55347 Y_RNA.667-201ENST00000516212 107 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 RNA5SP438-201ENST00000516561 112 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AC020937.1-201ENST00000519677 1013 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AC079064.1-201ENST00000528365 362 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AC006512.2-201ENST00000543250 486 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 HSPE1P2-201ENST00000554777 306 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.44□□□□□ -1.54
PKNOX1P55347 MIR4660-201ENST00000583549 74 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AC010487.1-201ENST00000594408 1172 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AC092944.2-201ENST00000605443 889 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AL359091.2-201ENST00000609303 556 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AL591926.1-201ENST00000620542 217 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AC024884.1-201ENST00000620583 399 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AC129778.1-202ENST00000623812 261 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.44□□□□□ -1.54
PKNOX1P55347 AL591379.1-207ENST00000635982 261 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.44□□□□□ -1.54
PKNOX1P55347 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.44□□□□□ -1.54
PKNOX1P55347 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PKNOX1P55347 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
PKNOX1P55347 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
PKNOX1P55347 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PKNOX1P55347 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.43□□□□□ -1.54
PKNOX1P55347 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
PKNOX1P55347 AC027279.1-201ENST00000568885 4284 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PKNOX1P55347 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PKNOX1P55347 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PKNOX1P55347 AL009179.1-201ENST00000406085 265 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 AL358178.1-201ENST00000407698 397 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.43□□□□□ -1.54
PKNOX1P55347 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.43□□□□□ -1.54
PKNOX1P55347 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.43□□□□□ -1.54
PKNOX1P55347 RPS10P18-201ENST00000442662 495 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.43□□□□□ -1.54
PKNOX1P55347 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.43□□□□□ -1.54
PKNOX1P55347 AL161722.1-201ENST00000446972 1032 ntBASIC5.43□□□□□ -1.54
PKNOX1P55347 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms