Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX2P50458 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LHX2P50458 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LHX2P50458 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
LHX2P50458 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX2P50458 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX2P50458 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
LHX2P50458 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX2P50458 RN7SKP28-201ENST00000364770 305 ntBASIC5.03□□□□□ -1.6
LHX2P50458 RNU4-2-201ENST00000365668 141 ntBASIC5.03□□□□□ -1.6
LHX2P50458 RNU1-136P-201ENST00000384181 164 ntBASIC5.03□□□□□ -1.6
LHX2P50458 AL391361.1-201ENST00000405580 489 ntBASIC5.03□□□□□ -1.6
LHX2P50458 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX2P50458 RNF10P1-201ENST00000418589 369 ntBASIC5.03□□□□□ -1.6
LHX2P50458 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX2P50458 AC242426.1-201ENST00000435270 960 ntBASIC5.03□□□□□ -1.6
LHX2P50458 RPL35AP19-201ENST00000469425 329 ntBASIC5.03□□□□□ -1.6
LHX2P50458 AC090142.2-201ENST00000483263 416 ntBASIC5.03□□□□□ -1.6
LHX2P50458 RN7SL184P-201ENST00000488308 297 ntBASIC5.03□□□□□ -1.6
LHX2P50458 AC108693.1-201ENST00000496068 432 ntBASIC5.03□□□□□ -1.6
LHX2P50458 AC021146.10-201ENST00000515628 706 ntBASIC5.03□□□□□ -1.6
LHX2P50458 IGKV2-18-201ENST00000522607 343 ntBASIC5.03□□□□□ -1.6
LHX2P50458 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX2P50458 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX2P50458 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LHX2P50458 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX2P50458 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.03□□□□□ -1.6
LHX2P50458 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.03□□□□□ -1.6
LHX2P50458 AC007225.2-201ENST00000562529 256 ntBASIC5.03□□□□□ -1.6
LHX2P50458 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX2P50458 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX2P50458 AC012616.1-201ENST00000600294 197 ntBASIC5.03□□□□□ -1.6
LHX2P50458 AC132068.1-201ENST00000623805 459 ntBASIC5.03□□□□□ -1.6
LHX2P50458 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LHX2P50458 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LHX2P50458 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LHX2P50458 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
LHX2P50458 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX2P50458 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LHX2P50458 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
LHX2P50458 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LHX2P50458 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.03□□□□□ -1.6
LHX2P50458 AL158152.1-201ENST00000602652 1435 ntBASIC5.03□□□□□ -1.6
LHX2P50458 AC011933.2-201ENST00000578539 2790 ntBASIC5.03□□□□□ -1.6
LHX2P50458 CASC19-248ENST00000641674 1356 ntBASIC5.03□□□□□ -1.6
LHX2P50458 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
LHX2P50458 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.02□□□□□ -1.61
LHX2P50458 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LHX2P50458 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LHX2P50458 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
LHX2P50458 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.02□□□□□ -1.61
LHX2P50458 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 RNA5SP234-201ENST00000363916 119 ntBASIC5.02□□□□□ -1.61
LHX2P50458 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.02□□□□□ -1.61
LHX2P50458 TMEM183AP1-205ENST00000432739 290 ntBASIC5.02□□□□□ -1.61
LHX2P50458 OR6D1P-201ENST00000436165 939 ntBASIC5.02□□□□□ -1.61
LHX2P50458 AL596266.1-201ENST00000448132 400 ntBASIC5.02□□□□□ -1.61
LHX2P50458 RANP1-206ENST00000455094 651 ntBASIC5.02□□□□□ -1.61
LHX2P50458 AC100832.1-201ENST00000471945 383 ntBASIC5.02□□□□□ -1.61
LHX2P50458 SIAH1P1-201ENST00000479411 923 ntBASIC5.02□□□□□ -1.61
LHX2P50458 EIF3LP3-201ENST00000495197 822 ntBASIC5.02□□□□□ -1.61
LHX2P50458 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.02□□□□□ -1.61
LHX2P50458 AC026782.2-201ENST00000510845 636 ntBASIC5.02□□□□□ -1.61
LHX2P50458 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.02□□□□□ -1.61
LHX2P50458 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.02□□□□□ -1.61
LHX2P50458 AC137627.1-201ENST00000545761 289 ntBASIC5.02□□□□□ -1.61
LHX2P50458 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.02□□□□□ -1.61
LHX2P50458 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.02□□□□□ -1.61
LHX2P50458 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.02□□□□□ -1.61
LHX2P50458 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 AC010245.2-201ENST00000606908 1167 ntBASIC5.02□□□□□ -1.61
LHX2P50458 AC007204.2-201ENST00000615022 616 ntBASIC5.02□□□□□ -1.61
LHX2P50458 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.02□□□□□ -1.61
LHX2P50458 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LHX2P50458 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
LHX2P50458 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.01□□□□□ -1.61
LHX2P50458 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 CIR1P2-201ENST00000514821 1342 ntBASIC5.01□□□□□ -1.61
LHX2P50458 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
LHX2P50458 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LHX2P50458 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms