Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX3P41225 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SOX3P41225 AC138761.5-201ENST00000433967 325 ntBASIC5.36□□□□□ -1.55
SOX3P41225 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.36□□□□□ -1.55
SOX3P41225 MED28P3-201ENST00000444288 531 ntBASIC5.36□□□□□ -1.55
SOX3P41225 HMGN1P36-201ENST00000446623 298 ntBASIC5.36□□□□□ -1.55
SOX3P41225 FRG2FP-204ENST00000453982 852 ntBASIC5.36□□□□□ -1.55
SOX3P41225 AC079080.1-201ENST00000479841 822 ntBASIC5.36□□□□□ -1.55
SOX3P41225 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SOX3P41225 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX3P41225 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX3P41225 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX3P41225 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.36□□□□□ -1.55
SOX3P41225 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX3P41225 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX3P41225 AP001496.3-201ENST00000580230 913 ntBASIC5.36□□□□□ -1.55
SOX3P41225 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX3P41225 AC009303.3-201ENST00000591103 736 ntBASIC5.36□□□□□ -1.55
SOX3P41225 BNIP3P7-201ENST00000605641 516 ntBASIC5.36□□□□□ -1.55
SOX3P41225 AC022919.1-201ENST00000624979 626 ntBASIC5.36□□□□□ -1.55
SOX3P41225 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX3P41225 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX3P41225 AL355480.1-201ENST00000629041 99 ntBASIC5.36□□□□□ -1.55
SOX3P41225 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX3P41225 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.36□□□□□ -1.55
SOX3P41225 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SOX3P41225 MIR193BHG-214ENST00000641765 509 ntBASIC5.36□□□□□ -1.55
SOX3P41225 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX3P41225 BX284613.1-201ENST00000452221 1641 ntBASIC5.36□□□□□ -1.55
SOX3P41225 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SOX3P41225 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
SOX3P41225 AC137056.2-201ENST00000624055 1958 ntBASIC5.36□□□□□ -1.55
SOX3P41225 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX3P41225 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
SOX3P41225 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX3P41225 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SOX3P41225 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SOX3P41225 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SOX3P41225 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SOX3P41225 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SOX3P41225 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX3P41225 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SOX3P41225 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX3P41225 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SOX3P41225 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SOX3P41225 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX3P41225 FBXL21-201ENST00000297158 1305 ntBASIC5.35□□□□□ -1.55
SOX3P41225 HMGB1P20-201ENST00000402555 677 ntBASIC5.35□□□□□ -1.55
SOX3P41225 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX3P41225 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX3P41225 SUMO2P3-201ENST00000438311 288 ntBASIC5.35□□□□□ -1.55
SOX3P41225 AL391987.1-201ENST00000441025 200 ntBASIC5.35□□□□□ -1.55
SOX3P41225 AC064862.4-201ENST00000442180 334 ntBASIC5.35□□□□□ -1.55
SOX3P41225 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.35□□□□□ -1.55
SOX3P41225 RNU1-88P-201ENST00000459274 128 ntBASIC5.35□□□□□ -1.55
SOX3P41225 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX3P41225 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SOX3P41225 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.35□□□□□ -1.55
SOX3P41225 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.35□□□□□ -1.55
SOX3P41225 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX3P41225 CYCSP22-201ENST00000517555 339 ntBASIC5.35□□□□□ -1.55
SOX3P41225 HNRNPRP2-201ENST00000528421 743 ntBASIC5.35□□□□□ -1.55
SOX3P41225 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.35□□□□□ -1.55
SOX3P41225 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX3P41225 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.35□□□□□ -1.55
SOX3P41225 AC007346.2-201ENST00000564816 892 ntBASIC5.35□□□□□ -1.55
SOX3P41225 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.35□□□□□ -1.55
SOX3P41225 AC012146.2-201ENST00000576545 416 ntBASIC5.35□□□□□ -1.55
SOX3P41225 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.35□□□□□ -1.55
SOX3P41225 MIR4260-201ENST00000583107 67 ntBASIC5.35□□□□□ -1.55
SOX3P41225 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX3P41225 SNORA35B-201ENST00000607417 129 ntBASIC5.35□□□□□ -1.55
SOX3P41225 AC126175.1-201ENST00000617041 758 ntBASIC5.35□□□□□ -1.55
SOX3P41225 RN7SL544P-201ENST00000617232 284 ntBASIC5.35□□□□□ -1.55
SOX3P41225 AL355974.3-201ENST00000617383 467 ntBASIC5.35□□□□□ -1.55
SOX3P41225 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX3P41225 AL391597.1-201ENST00000618707 694 ntBASIC5.35□□□□□ -1.55
SOX3P41225 RN7SL763P-201ENST00000620922 284 ntBASIC5.35□□□□□ -1.55
SOX3P41225 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SOX3P41225 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.35□□□□□ -1.55
SOX3P41225 AC087565.3-203ENST00000641018 837 ntBASIC5.35□□□□□ -1.55
SOX3P41225 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX3P41225 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SOX3P41225 OR13C1P-202ENST00000641378 2919 ntBASIC5.35□□□□□ -1.55
SOX3P41225 MFSD8-219ENST00000641228 2559 ntBASIC5.35□□□□□ -1.55
SOX3P41225 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SOX3P41225 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
SOX3P41225 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.35□□□□□ -1.55
SOX3P41225 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SOX3P41225 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX3P41225 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX3P41225 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX3P41225 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
SOX3P41225 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.34□□□□□ -1.55
SOX3P41225 AL158152.1-201ENST00000602652 1435 ntBASIC5.34□□□□□ -1.55
SOX3P41225 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX3P41225 AP004607.3-201ENST00000530354 3915 ntBASIC5.34□□□□□ -1.55
SOX3P41225 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SOX3P41225 RNA5SP394-201ENST00000364216 119 ntBASIC5.34□□□□□ -1.55
SOX3P41225 RN7SKP81-201ENST00000365603 331 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms