Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.6□□□□□ -1.51
RPA3P35244 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.6□□□□□ -1.51
RPA3P35244 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
RPA3P35244 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
RPA3P35244 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 RNU1-150P-201ENST00000362491 162 ntBASIC5.6□□□□□ -1.51
RPA3P35244 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.6□□□□□ -1.51
RPA3P35244 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.6□□□□□ -1.51
RPA3P35244 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.6□□□□□ -1.51
RPA3P35244 RPS3P2-201ENST00000421346 701 ntBASIC5.6□□□□□ -1.51
RPA3P35244 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.6□□□□□ -1.51
RPA3P35244 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.6□□□□□ -1.51
RPA3P35244 AL512637.1-201ENST00000439523 1231 ntBASIC5.6□□□□□ -1.51
RPA3P35244 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 AZGP1P2-201ENST00000454506 345 ntBASIC5.6□□□□□ -1.51
RPA3P35244 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.6□□□□□ -1.51
RPA3P35244 AC011476.1-201ENST00000466725 307 ntBASIC5.6□□□□□ -1.51
RPA3P35244 RN7SL188P-201ENST00000469842 285 ntBASIC5.6□□□□□ -1.51
RPA3P35244 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.6□□□□□ -1.51
RPA3P35244 AC074255.1-201ENST00000511259 501 ntBASIC5.6□□□□□ -1.51
RPA3P35244 SNORA70.20-201ENST00000516848 126 ntBASIC5.6□□□□□ -1.51
RPA3P35244 IGLV3-24-201ENST00000517477 197 ntBASIC5.6□□□□□ -1.51
RPA3P35244 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.6□□□□□ -1.51
RPA3P35244 OR5AM1P-201ENST00000532136 1032 ntBASIC5.6□□□□□ -1.51
RPA3P35244 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.6□□□□□ -1.51
RPA3P35244 AC079600.1-201ENST00000550326 297 ntBASIC5.6□□□□□ -1.51
RPA3P35244 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.6□□□□□ -1.51
RPA3P35244 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.6□□□□□ -1.51
RPA3P35244 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.6□□□□□ -1.51
RPA3P35244 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.6□□□□□ -1.51
RPA3P35244 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
RPA3P35244 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.6□□□□□ -1.51
RPA3P35244 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RPA3P35244 PWAR1-201ENST00000624188 2414 ntBASIC5.59□□□□□ -1.51
RPA3P35244 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RPA3P35244 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.59□□□□□ -1.51
RPA3P35244 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
RPA3P35244 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.59□□□□□ -1.51
RPA3P35244 AL078621.3-201ENST00000623707 2042 ntBASIC5.59□□□□□ -1.51
RPA3P35244 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RPA3P35244 GVINP1-202ENST00000531871 7271 ntBASIC5.59□□□□□ -1.51
RPA3P35244 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RPA3P35244 OR52B3P-201ENST00000314715 928 ntBASIC5.59□□□□□ -1.51
RPA3P35244 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RPA3P35244 U3.7-201ENST00000363668 216 ntBASIC5.59□□□□□ -1.51
RPA3P35244 RNA5SP241-201ENST00000391326 114 ntBASIC5.59□□□□□ -1.51
RPA3P35244 PEX12P1-201ENST00000400284 1048 ntBASIC5.59□□□□□ -1.51
RPA3P35244 RPS3AP2-201ENST00000407190 754 ntBASIC5.59□□□□□ -1.51
RPA3P35244 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.59□□□□□ -1.51
RPA3P35244 SLC20A1P1-201ENST00000413906 956 ntBASIC5.59□□□□□ -1.51
RPA3P35244 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
RPA3P35244 RIMKLBP2-201ENST00000424737 654 ntBASIC5.59□□□□□ -1.51
RPA3P35244 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RPA3P35244 AC073610.1-201ENST00000489971 396 ntBASIC5.59□□□□□ -1.51
RPA3P35244 AC021106.1-201ENST00000509020 1058 ntBASIC5.59□□□□□ -1.51
RPA3P35244 AC091912.1-201ENST00000511351 248 ntBASIC5.59□□□□□ -1.51
RPA3P35244 AC130364.2-201ENST00000528639 604 ntBASIC5.59□□□□□ -1.51
RPA3P35244 PMS2P3-207ENST00000529061 717 ntBASIC5.59□□□□□ -1.51
RPA3P35244 TRIM51DP-201ENST00000529746 596 ntBASIC5.59□□□□□ -1.51
RPA3P35244 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
RPA3P35244 NANOGNBP2-201ENST00000544753 553 ntBASIC5.59□□□□□ -1.51
RPA3P35244 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.59□□□□□ -1.51
RPA3P35244 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.59□□□□□ -1.51
RPA3P35244 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.59□□□□□ -1.51
RPA3P35244 MIR6861-201ENST00000618657 64 ntBASIC5.59□□□□□ -1.51
RPA3P35244 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.59□□□□□ -1.51
RPA3P35244 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RPA3P35244 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RPA3P35244 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RPA3P35244 AL022311.1-201ENST00000623726 19416 ntBASIC5.59□□□□□ -1.51
RPA3P35244 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RPA3P35244 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
RPA3P35244 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RPA3P35244 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.59□□□□□ -1.52
RPA3P35244 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
RPA3P35244 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RPA3P35244 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
RPA3P35244 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.59□□□□□ -1.52
RPA3P35244 ADAM5-202ENST00000399789 1942 ntBASIC5.58□□□□□ -1.52
RPA3P35244 AC073136.1-201ENST00000449426 2884 ntBASIC5.58□□□□□ -1.52
RPA3P35244 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RPA3P35244 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RPA3P35244 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RPA3P35244 AC144833.1-201ENST00000567953 4089 ntBASIC5.58□□□□□ -1.52
RPA3P35244 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RPA3P35244 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RPA3P35244 GAPDHP24-201ENST00000328713 983 ntBASIC5.58□□□□□ -1.52
RPA3P35244 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.58□□□□□ -1.52
RPA3P35244 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RPA3P35244 OR7E101P-201ENST00000400428 513 ntBASIC5.58□□□□□ -1.52
RPA3P35244 LYPLA1P3-201ENST00000402650 695 ntBASIC5.58□□□□□ -1.52
RPA3P35244 NME1P1-201ENST00000420914 382 ntBASIC5.58□□□□□ -1.52
RPA3P35244 IPPKP1-201ENST00000422501 768 ntBASIC5.58□□□□□ -1.52
RPA3P35244 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms