Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC087272.1-201ENST00000523624 533 ntBASIC5.18□□□□□ -1.58
SHC1P29353 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SHC1P29353 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.18□□□□□ -1.58
SHC1P29353 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 AC008521.2-201ENST00000591021 259 ntBASIC5.18□□□□□ -1.58
SHC1P29353 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.18□□□□□ -1.58
SHC1P29353 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.18□□□□□ -1.58
SHC1P29353 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.18□□□□□ -1.58
SHC1P29353 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
SHC1P29353 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.18□□□□□ -1.58
SHC1P29353 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.18□□□□□ -1.58
SHC1P29353 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SHC1P29353 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHC1P29353 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SHC1P29353 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.18□□□□□ -1.58
SHC1P29353 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.17□□□□□ -1.58
SHC1P29353 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SHC1P29353 AC015689.2-201ENST00000528172 1738 ntBASIC5.17□□□□□ -1.58
SHC1P29353 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 RNF19BPY-201ENST00000458209 1550 ntBASIC5.17□□□□□ -1.58
SHC1P29353 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SHC1P29353 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 MRE11P1-201ENST00000464884 2127 ntBASIC5.17□□□□□ -1.58
SHC1P29353 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 MIR375-201ENST00000362103 64 ntBASIC5.17□□□□□ -1.58
SHC1P29353 RNA5SP284-201ENST00000384547 118 ntBASIC5.17□□□□□ -1.58
SHC1P29353 MIR130A-201ENST00000385274 89 ntBASIC5.17□□□□□ -1.58
SHC1P29353 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHC1P29353 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SHC1P29353 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.17□□□□□ -1.58
SHC1P29353 NIFKP3-201ENST00000417799 865 ntBASIC5.17□□□□□ -1.58
SHC1P29353 AC019205.1-201ENST00000421830 730 ntBASIC5.17□□□□□ -1.58
SHC1P29353 RPL23AP19-201ENST00000436229 369 ntBASIC5.17□□□□□ -1.58
SHC1P29353 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.17□□□□□ -1.58
SHC1P29353 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.17□□□□□ -1.58
SHC1P29353 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.17□□□□□ -1.58
SHC1P29353 OR7E116P-201ENST00000448529 957 ntBASIC5.17□□□□□ -1.58
SHC1P29353 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.17□□□□□ -1.58
SHC1P29353 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.17□□□□□ -1.58
SHC1P29353 AC021678.3-201ENST00000517893 476 ntBASIC5.17□□□□□ -1.58
SHC1P29353 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.17□□□□□ -1.58
SHC1P29353 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.17□□□□□ -1.58
SHC1P29353 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.17□□□□□ -1.58
SHC1P29353 AL121594.2-201ENST00000541658 472 ntBASIC5.17□□□□□ -1.58
SHC1P29353 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.17□□□□□ -1.58
SHC1P29353 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.17□□□□□ -1.58
SHC1P29353 HSPE1P2-201ENST00000554777 306 ntBASIC5.17□□□□□ -1.58
SHC1P29353 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
SHC1P29353 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.17□□□□□ -1.58
SHC1P29353 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.17□□□□□ -1.58
SHC1P29353 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.17□□□□□ -1.58
SHC1P29353 AC009962.1-201ENST00000567327 3813 ntBASIC5.17□□□□□ -1.58
SHC1P29353 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.17□□□□□ -1.58
SHC1P29353 MIR3614-201ENST00000581261 86 ntBASIC5.17□□□□□ -1.58
SHC1P29353 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.17□□□□□ -1.58
SHC1P29353 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.17□□□□□ -1.58
SHC1P29353 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.17□□□□□ -1.58
SHC1P29353 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 RN7SL544P-201ENST00000617232 284 ntBASIC5.17□□□□□ -1.58
SHC1P29353 RN7SL763P-201ENST00000620922 284 ntBASIC5.17□□□□□ -1.58
SHC1P29353 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
SHC1P29353 AC087565.3-203ENST00000641018 837 ntBASIC5.17□□□□□ -1.58
SHC1P29353 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.17□□□□□ -1.58
SHC1P29353 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
SHC1P29353 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 AC117409.1-201ENST00000470499 1310 ntBASIC5.17□□□□□ -1.58
SHC1P29353 AP001029.2-203ENST00000589795 4910 ntBASIC5.17□□□□□ -1.58
SHC1P29353 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SHC1P29353 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SHC1P29353 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SHC1P29353 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.17□□□□□ -1.58
SHC1P29353 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SHC1P29353 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
SHC1P29353 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.16□□□□□ -1.58
SHC1P29353 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.16□□□□□ -1.58
SHC1P29353 OR9K1P-202ENST00000641111 3217 ntBASIC5.16□□□□□ -1.58
SHC1P29353 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHC1P29353 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHC1P29353 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SHC1P29353 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
SHC1P29353 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SHC1P29353 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SHC1P29353 AC090220.1-201ENST00000593078 1699 ntBASIC5.16□□□□□ -1.58
SHC1P29353 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms