Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.74□□□□□ -1.65
COL8A2P25067 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
COL8A2P25067 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
COL8A2P25067 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
COL8A2P25067 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
COL8A2P25067 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
COL8A2P25067 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
COL8A2P25067 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.73□□□□□ -1.65
COL8A2P25067 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
COL8A2P25067 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 AC027279.1-201ENST00000568885 4284 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
COL8A2P25067 RNA5SP319-201ENST00000362768 119 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.73□□□□□ -1.65
COL8A2P25067 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.73□□□□□ -1.65
COL8A2P25067 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.73□□□□□ -1.65
COL8A2P25067 SPRYD7P1-201ENST00000443861 570 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 AC009963.4-201ENST00000448535 339 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.73□□□□□ -1.65
COL8A2P25067 VDAC2P4-201ENST00000452925 711 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 AC100832.1-201ENST00000471945 383 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 RPS7P6-201ENST00000485777 579 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.73□□□□□ -1.65
COL8A2P25067 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.73□□□□□ -1.65
COL8A2P25067 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.73□□□□□ -1.65
COL8A2P25067 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC4.73□□□□□ -1.65
COL8A2P25067 AP000619.2-201ENST00000546014 969 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.73□□□□□ -1.65
COL8A2P25067 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.73□□□□□ -1.65
COL8A2P25067 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.73□□□□□ -1.65
COL8A2P25067 AL163952.1-202ENST00000569625 600 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 DHFRP1-201ENST00000579682 559 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.73□□□□□ -1.65
COL8A2P25067 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.73□□□□□ -1.65
COL8A2P25067 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.73□□□□□ -1.65
COL8A2P25067 MIR8080-201ENST00000622224 89 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.73□□□□□ -1.65
COL8A2P25067 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 AL034546.1-201ENST00000623740 3693 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 AL592429.1-201ENST00000403909 1473 ntBASIC4.73□□□□□ -1.65
COL8A2P25067 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
COL8A2P25067 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
COL8A2P25067 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
COL8A2P25067 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL8A2P25067 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL8A2P25067 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL8A2P25067 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC4.72□□□□□ -1.65
COL8A2P25067 AC025470.1-201ENST00000510053 2032 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
COL8A2P25067 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL8A2P25067 GAPDHP24-201ENST00000328713 983 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.72□□□□□ -1.65
COL8A2P25067 AL009179.1-201ENST00000406085 265 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 AL355433.1-201ENST00000422804 300 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.72□□□□□ -1.65
COL8A2P25067 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.72□□□□□ -1.65
COL8A2P25067 AL390879.1-201ENST00000439143 386 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 RN7SL51P-201ENST00000468230 285 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.72□□□□□ -1.65
COL8A2P25067 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.72□□□□□ -1.65
COL8A2P25067 AC090638.1-201ENST00000498296 909 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.72□□□□□ -1.65
COL8A2P25067 RN7SKP99-201ENST00000517028 307 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.72□□□□□ -1.65
COL8A2P25067 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.72□□□□□ -1.65
COL8A2P25067 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.72□□□□□ -1.65
COL8A2P25067 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.72□□□□□ -1.65
COL8A2P25067 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.72□□□□□ -1.65
COL8A2P25067 MIR1269B-201ENST00000580405 75 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 SUGT1P3-202ENST00000604259 383 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 AC000095.2-202ENST00000637415 154 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL8A2P25067 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL8A2P25067 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL8A2P25067 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.72□□□□□ -1.65
COL8A2P25067 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL8A2P25067 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
COL8A2P25067 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
COL8A2P25067 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.72□□□□□ -1.65
COL8A2P25067 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
COL8A2P25067 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.72□□□□□ -1.65
COL8A2P25067 CYP4Z2P-201ENST00000423332 1512 ntBASIC4.72□□□□□ -1.65
COL8A2P25067 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
COL8A2P25067 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
COL8A2P25067 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
COL8A2P25067 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
COL8A2P25067 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.65
COL8A2P25067 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
COL8A2P25067 AC004076.2-201ENST00000620532 3323 ntBASIC4.71□□□□□ -1.66
COL8A2P25067 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 139.1 ms