Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AL445222.1-201ENST00000607259 628 ntBASIC5.69□□□□□ -1.5
HMGA1P17096 AC037198.3-201ENST00000616754 526 ntBASIC5.69□□□□□ -1.5
HMGA1P17096 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGA1P17096 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC5.69□□□□□ -1.5
HMGA1P17096 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGA1P17096 AC011493.1-201ENST00000596753 1632 ntBASIC5.69□□□□□ -1.5
HMGA1P17096 OR55B1P-203ENST00000641518 2602 ntBASIC5.69□□□□□ -1.5
HMGA1P17096 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.69□□□□□ -1.5
HMGA1P17096 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGA1P17096 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HMGA1P17096 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGA1P17096 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGA1P17096 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGA1P17096 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HMGA1P17096 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HMGA1P17096 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 ABCA11P-202ENST00000504019 2110 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
HMGA1P17096 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGA1P17096 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
HMGA1P17096 AL359955.1-201ENST00000455242 3275 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 RPL23P2-201ENST00000320371 421 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 AL451142.1-201ENST00000375867 775 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 RPL23AP27-201ENST00000415161 451 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGA1P17096 RPL7P56-201ENST00000429441 717 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 SBDSP1-204ENST00000453858 737 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 BX284632.1-201ENST00000478218 541 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGA1P17096 RN7SL808P-201ENST00000496066 299 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 ST13P12-201ENST00000508958 1094 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 RNA5SP373-201ENST00000517271 95 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 OR4A46P-201ENST00000527255 933 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 NMNAT1P5-201ENST00000559657 841 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGA1P17096 AC069307.1-201ENST00000602820 447 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGA1P17096 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGA1P17096 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGA1P17096 AP002505.2-201ENST00000623585 696 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 AC069542.2-201ENST00000624816 216 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGA1P17096 AC079776.5-201ENST00000641920 211 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.68□□□□□ -1.5
HMGA1P17096 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
HMGA1P17096 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 CR383656.5-201ENST00000547616 1340 ntBASIC5.68□□□□□ -1.5
HMGA1P17096 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGA1P17096 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.68□□□□□ -1.5
HMGA1P17096 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
HMGA1P17096 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.68□□□□□ -1.5
HMGA1P17096 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGA1P17096 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGA1P17096 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HMGA1P17096 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
HMGA1P17096 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGA1P17096 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGA1P17096 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGA1P17096 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
HMGA1P17096 SNORA74A-201ENST00000364089 198 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 RNU1-149P-201ENST00000390870 161 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 AL645927.1-201ENST00000396783 406 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGA1P17096 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGA1P17096 AC093655.2-201ENST00000425735 631 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 NPM1P22-201ENST00000427761 952 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.67□□□□□ -1.5
HMGA1P17096 RPL12P17-201ENST00000432393 498 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 GAPDHP25-201ENST00000447061 1001 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGA1P17096 RPL15P21-201ENST00000495592 567 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 AC015864.1-201ENST00000496512 544 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 NDUFA5P12-201ENST00000503796 343 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGA1P17096 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGA1P17096 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.67□□□□□ -1.5
HMGA1P17096 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGA1P17096 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMGA1P17096 AC127381.1-201ENST00000555979 939 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 829.7 ms