Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
COL11A1P12107 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL11A1P12107 NBPF8-201ENST00000583271 5330 ntBASIC6.17□□□□□ -1.42
COL11A1P12107 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL11A1P12107 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL11A1P12107 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COL11A1P12107 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.17□□□□□ -1.42
COL11A1P12107 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COL11A1P12107 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.17□□□□□ -1.42
COL11A1P12107 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
COL11A1P12107 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.17□□□□□ -1.42
COL11A1P12107 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
COL11A1P12107 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.17□□□□□ -1.42
COL11A1P12107 FABP12P1-201ENST00000401911 322 ntBASIC6.17□□□□□ -1.42
COL11A1P12107 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.17□□□□□ -1.42
COL11A1P12107 ATP5LP5-201ENST00000483050 299 ntBASIC6.17□□□□□ -1.42
COL11A1P12107 snoU109.5-201ENST00000516231 132 ntBASIC6.17□□□□□ -1.42
COL11A1P12107 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.17□□□□□ -1.42
COL11A1P12107 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL11A1P12107 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.17□□□□□ -1.42
COL11A1P12107 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.17□□□□□ -1.42
COL11A1P12107 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.17□□□□□ -1.42
COL11A1P12107 NPM1P42-201ENST00000560329 862 ntBASIC6.17□□□□□ -1.42
COL11A1P12107 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.17□□□□□ -1.42
COL11A1P12107 MTCO1P1-201ENST00000624263 1081 ntBASIC6.17□□□□□ -1.42
COL11A1P12107 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COL11A1P12107 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.17□□□□□ -1.42
COL11A1P12107 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL11A1P12107 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL11A1P12107 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL11A1P12107 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL11A1P12107 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.17□□□□□ -1.42
COL11A1P12107 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL11A1P12107 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL11A1P12107 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
COL11A1P12107 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.17□□□□□ -1.42
COL11A1P12107 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL11A1P12107 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.17□□□□□ -1.42
COL11A1P12107 AC079753.1-201ENST00000623243 3868 ntBASIC6.17□□□□□ -1.42
COL11A1P12107 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL11A1P12107 SNURFL-201ENST00000309296 343 ntBASIC6.16□□□□□ -1.42
COL11A1P12107 MTND4LP17-201ENST00000414607 293 ntBASIC6.16□□□□□ -1.42
COL11A1P12107 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.16□□□□□ -1.42
COL11A1P12107 RPS26P13-201ENST00000419030 330 ntBASIC6.16□□□□□ -1.42
COL11A1P12107 RIMKLBP2-201ENST00000424737 654 ntBASIC6.16□□□□□ -1.42
COL11A1P12107 RN7SL188P-201ENST00000469842 285 ntBASIC6.16□□□□□ -1.42
COL11A1P12107 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.16□□□□□ -1.42
COL11A1P12107 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC6.16□□□□□ -1.42
COL11A1P12107 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.16□□□□□ -1.42
COL11A1P12107 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.16□□□□□ -1.42
COL11A1P12107 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.16□□□□□ -1.42
COL11A1P12107 AL359715.3-201ENST00000569267 2123 ntBASIC6.16□□□□□ -1.42
COL11A1P12107 MIR4646-201ENST00000580775 63 ntBASIC6.16□□□□□ -1.42
COL11A1P12107 H3F3BP2-201ENST00000583907 357 ntBASIC6.16□□□□□ -1.42
COL11A1P12107 AC133644.2-201ENST00000608142 540 ntBASIC6.16□□□□□ -1.42
COL11A1P12107 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.16□□□□□ -1.42
COL11A1P12107 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.16□□□□□ -1.42
COL11A1P12107 AC119674.1-217ENST00000641942 1086 ntBASIC6.16□□□□□ -1.42
COL11A1P12107 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL11A1P12107 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.16□□□□□ -1.42
COL11A1P12107 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.16□□□□□ -1.42
COL11A1P12107 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COL11A1P12107 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL11A1P12107 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL11A1P12107 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL11A1P12107 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL11A1P12107 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.16□□□□□ -1.42
COL11A1P12107 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL11A1P12107 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
COL11A1P12107 SNORA17.1-201ENST00000362945 126 ntBASIC6.15□□□□□ -1.42
COL11A1P12107 MIR105-1-201ENST00000385222 81 ntBASIC6.15□□□□□ -1.42
COL11A1P12107 CRIP1P1-201ENST00000427567 185 ntBASIC6.15□□□□□ -1.42
COL11A1P12107 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.15□□□□□ -1.42
COL11A1P12107 RPL7P61-201ENST00000451721 751 ntBASIC6.15□□□□□ -1.42
COL11A1P12107 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.15□□□□□ -1.42
COL11A1P12107 RPS3AP41-201ENST00000462701 778 ntBASIC6.15□□□□□ -1.42
COL11A1P12107 RN7SL423P-201ENST00000486202 304 ntBASIC6.15□□□□□ -1.42
COL11A1P12107 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.15□□□□□ -1.42
COL11A1P12107 AC013701.1-201ENST00000522657 465 ntBASIC6.15□□□□□ -1.42
COL11A1P12107 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.15□□□□□ -1.42
COL11A1P12107 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.15□□□□□ -1.42
COL11A1P12107 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.15□□□□□ -1.42
COL11A1P12107 AC060780.2-201ENST00000589047 198 ntBASIC6.15□□□□□ -1.42
COL11A1P12107 AC060766.1-201ENST00000590824 627 ntBASIC6.15□□□□□ -1.42
COL11A1P12107 AP005432.2-201ENST00000608162 586 ntBASIC6.15□□□□□ -1.42
COL11A1P12107 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
COL11A1P12107 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL11A1P12107 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL11A1P12107 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL11A1P12107 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
COL11A1P12107 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL11A1P12107 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL11A1P12107 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL11A1P12107 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL11A1P12107 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
COL11A1P12107 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL11A1P12107 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
COL11A1P12107 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
COL11A1P12107 RN7SKP213-201ENST00000410746 298 ntBASIC6.15□□□□□ -1.43
COL11A1P12107 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms