Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC010975.3-201ENST00000618727 978 ntBASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 AC018755.4-201ENST00000619715 454 ntBASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 AL132640.2-201ENST00000559968 1698 ntBASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 OR4C1P-202ENST00000641065 1569 ntBASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC8.77□□□□□ -1.01
CSB-PGBD3P0DP91 Z99129.4-201ENST00000624649 2435 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 ZNF840P-201ENST00000504759 1996 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC079203.1-201ENST00000487972 404 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 SCARNA5-201ENST00000516201 276 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC007115.1-201ENST00000546853 234 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC009163.6-201ENST00000612367 342 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AL353626.1-201ENST00000613429 507 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC073968.1-201ENST00000618594 637 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AP002833.3-201ENST00000625075 2265 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC092104.1-201ENST00000497346 1441 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 KLHL2-209ENST00000514860 2442 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 AC023245.2-201ENST00000530760 2978 ntBASIC8.76□□□□□ -1.01
CSB-PGBD3P0DP91 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC108676.1-201ENST00000455557 2969 ntTSL 2 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC104837.1-201ENST00000444644 1587 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 Y_RNA.559-201ENST00000384686 107 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 RPS3AP26-201ENST00000398259 784 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 CYP4F32P-201ENST00000426492 504 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 RPL5P34-201ENST00000426545 891 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 IFNNP1-201ENST00000429219 553 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 PNKDP1-201ENST00000435914 430 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 ISCA1P2-201ENST00000438679 421 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 CST12P-201ENST00000457644 362 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC080014.1-201ENST00000496877 1201 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 RPL5P11-201ENST00000498068 893 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 XKRY-201ENST00000510392 1100 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 SNORA81.2-201ENST00000516868 170 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 GNG2-208ENST00000554875 430 ntTSL 5 BASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC008015.1-201ENST00000555505 465 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC008521.2-201ENST00000591021 259 ntBASIC8.75□□□□□ -1.01
CSB-PGBD3P0DP91 AC126175.1-201ENST00000617041 758 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms