Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC004890.1-201ENST00000461005 181 ntBASIC7.38□□□□□ -1.23
HMGB1P09429 APOOP2-201ENST00000461561 539 ntBASIC7.38□□□□□ -1.23
HMGB1P09429 RPS7P10-201ENST00000464254 603 ntBASIC7.38□□□□□ -1.23
HMGB1P09429 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGB1P09429 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGB1P09429 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.38□□□□□ -1.23
HMGB1P09429 NACAP5-201ENST00000509863 636 ntBASIC7.38□□□□□ -1.23
HMGB1P09429 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.38□□□□□ -1.23
HMGB1P09429 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.38□□□□□ -1.23
HMGB1P09429 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGB1P09429 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC7.38□□□□□ -1.23
HMGB1P09429 AP001804.1-201ENST00000526868 919 ntBASIC7.38□□□□□ -1.23
HMGB1P09429 AP001858.2-201ENST00000536213 601 ntBASIC7.38□□□□□ -1.23
HMGB1P09429 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGB1P09429 MIR4420-201ENST00000583944 77 ntBASIC7.38□□□□□ -1.23
HMGB1P09429 AC018618.2-201ENST00000604770 446 ntBASIC7.38□□□□□ -1.23
HMGB1P09429 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGB1P09429 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGB1P09429 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGB1P09429 AL162377.2-201ENST00000624532 337 ntBASIC7.38□□□□□ -1.23
HMGB1P09429 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.38□□□□□ -1.23
HMGB1P09429 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
HMGB1P09429 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
HMGB1P09429 RNF6P1-201ENST00000444889 1784 ntBASIC7.38□□□□□ -1.23
HMGB1P09429 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.38□□□□□ -1.23
HMGB1P09429 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.38□□□□□ -1.23
HMGB1P09429 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
HMGB1P09429 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 AC090181.3-201ENST00000624777 1514 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC7.37□□□□□ -1.23
HMGB1P09429 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
HMGB1P09429 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.37□□□□□ -1.23
HMGB1P09429 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.37□□□□□ -1.23
HMGB1P09429 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC7.37□□□□□ -1.23
HMGB1P09429 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.37□□□□□ -1.23
HMGB1P09429 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 RNU6-650P-201ENST00000365658 111 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
HMGB1P09429 RNU6-146P-201ENST00000384602 108 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 AL157702.1-201ENST00000398764 426 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 AL451046.1-201ENST00000406097 534 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 AL139805.1-201ENST00000407837 289 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.37□□□□□ -1.23
HMGB1P09429 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.37□□□□□ -1.23
HMGB1P09429 USP9YP19-201ENST00000412165 485 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC7.37□□□□□ -1.23
HMGB1P09429 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC7.37□□□□□ -1.23
HMGB1P09429 AL158073.1-201ENST00000426848 1104 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 RPS24P8-201ENST00000431490 402 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 MTND6P18-201ENST00000439477 513 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 MED6P1-201ENST00000439659 713 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 AL353093.1-201ENST00000441292 436 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 DNAJC19P5-201ENST00000443295 316 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.37□□□□□ -1.23
HMGB1P09429 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.37□□□□□ -1.23
HMGB1P09429 AC069540.1-201ENST00000446320 988 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.37□□□□□ -1.23
HMGB1P09429 AC006511.1-201ENST00000470614 315 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.37□□□□□ -1.23
HMGB1P09429 CYP4F27P-201ENST00000514557 494 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 SNORA70.11-201ENST00000515987 138 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 SNORA70.13-201ENST00000516116 138 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 RNU6-941P-201ENST00000516346 108 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC7.37□□□□□ -1.23
HMGB1P09429 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC7.37□□□□□ -1.23
HMGB1P09429 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 AC026523.2-201ENST00000625039 7739 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.37□□□□□ -1.23
HMGB1P09429 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
HMGB1P09429 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
HMGB1P09429 AC068446.1-201ENST00000556425 1549 ntBASIC7.37□□□□□ -1.23
HMGB1P09429 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC7.37□□□□□ -1.23
HMGB1P09429 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.37□□□□□ -1.23
HMGB1P09429 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
HMGB1P09429 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
HMGB1P09429 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HMGB1P09429 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HMGB1P09429 PWAR1-201ENST00000624188 2414 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HMGB1P09429 SNORA43.1-201ENST00000364863 140 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 RNA5SP77-201ENST00000365394 120 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HMGB1P09429 PSMA6P1-201ENST00000400275 741 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HMGB1P09429 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.36□□□□□ -1.23
HMGB1P09429 LINC01347-201ENST00000417964 355 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC7.36□□□□□ -1.23
HMGB1P09429 Z82198.3-201ENST00000421145 199 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC7.36□□□□□ -1.23
HMGB1P09429 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms