Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC5.15□□□□□ -1.58
SPTA1P02549 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SPTA1P02549 RNA5SP91-201ENST00000390902 119 ntBASIC5.15□□□□□ -1.58
SPTA1P02549 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.15□□□□□ -1.58
SPTA1P02549 HMGB3P24-201ENST00000433260 622 ntBASIC5.15□□□□□ -1.58
SPTA1P02549 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.15□□□□□ -1.58
SPTA1P02549 GAPDHP25-201ENST00000447061 1001 ntBASIC5.15□□□□□ -1.58
SPTA1P02549 RPL23AP60-201ENST00000450011 454 ntBASIC5.15□□□□□ -1.58
SPTA1P02549 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.15□□□□□ -1.58
SPTA1P02549 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.15□□□□□ -1.58
SPTA1P02549 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.15□□□□□ -1.58
SPTA1P02549 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.15□□□□□ -1.58
SPTA1P02549 AC011447.4-201ENST00000587562 111 ntBASIC5.15□□□□□ -1.58
SPTA1P02549 AC024589.2-201ENST00000605642 1294 ntBASIC5.15□□□□□ -1.58
SPTA1P02549 AC000068.2-201ENST00000608816 460 ntBASIC5.15□□□□□ -1.58
SPTA1P02549 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SPTA1P02549 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SPTA1P02549 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SPTA1P02549 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SPTA1P02549 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SPTA1P02549 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
SPTA1P02549 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SPTA1P02549 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SPTA1P02549 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SPTA1P02549 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SPTA1P02549 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SPTA1P02549 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SPTA1P02549 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SPTA1P02549 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SPTA1P02549 NIFKP3-201ENST00000417799 865 ntBASIC5.15□□□□□ -1.59
SPTA1P02549 AC092570.3-201ENST00000420113 693 ntBASIC5.15□□□□□ -1.59
SPTA1P02549 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC5.15□□□□□ -1.59
SPTA1P02549 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC5.15□□□□□ -1.59
SPTA1P02549 AC087672.1-201ENST00000479876 766 ntBASIC5.15□□□□□ -1.59
SPTA1P02549 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.15□□□□□ -1.59
SPTA1P02549 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.15□□□□□ -1.59
SPTA1P02549 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC5.15□□□□□ -1.59
SPTA1P02549 MIR4260-201ENST00000583107 67 ntBASIC5.15□□□□□ -1.59
SPTA1P02549 AC012616.1-201ENST00000600294 197 ntBASIC5.15□□□□□ -1.59
SPTA1P02549 AC008745.1-201ENST00000604064 271 ntBASIC5.15□□□□□ -1.59
SPTA1P02549 MIR92B-201ENST00000607575 96 ntBASIC5.15□□□□□ -1.59
SPTA1P02549 AC116631.1-202ENST00000640984 683 ntBASIC5.15□□□□□ -1.59
SPTA1P02549 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SPTA1P02549 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SPTA1P02549 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.14□□□□□ -1.59
SPTA1P02549 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.14□□□□□ -1.59
SPTA1P02549 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 OR10R3P-201ENST00000361688 942 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 SNORA48.7-201ENST00000391302 135 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.14□□□□□ -1.59
SPTA1P02549 AC105399.1-202ENST00000447303 205 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 NUTF2P7-201ENST00000453086 375 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 AC002075.1-201ENST00000457396 676 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 OR5AN2P-201ENST00000534535 896 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 BLZF2P-201ENST00000553776 1130 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.14□□□□□ -1.59
SPTA1P02549 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.14□□□□□ -1.59
SPTA1P02549 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 AL390318.1-201ENST00000624564 687 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC5.14□□□□□ -1.59
SPTA1P02549 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.14□□□□□ -1.59
SPTA1P02549 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 RNU4-2-201ENST00000365668 141 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 GLULP6-201ENST00000399502 913 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 PRUNEP1-201ENST00000425846 705 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 AC016712.1-201ENST00000431088 378 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.14□□□□□ -1.59
SPTA1P02549 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 CCDC11P1-201ENST00000503137 1162 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.14□□□□□ -1.59
SPTA1P02549 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.14□□□□□ -1.59
SPTA1P02549 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.14□□□□□ -1.59
SPTA1P02549 AC068790.7-201ENST00000602347 528 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 AL590392.1-201ENST00000604960 446 ntBASIC5.14□□□□□ -1.59
SPTA1P02549 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
SPTA1P02549 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SPTA1P02549 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms