Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RAPGEF3O95398 RNA5SP87-201ENST00000384155 118 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 RNU1-149P-201ENST00000390870 161 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 AL590139.1-201ENST00000416267 400 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 AK3P5-201ENST00000432033 519 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC073648.4-201ENST00000442655 781 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 BZW1P1-201ENST00000454901 1240 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 AL022319.1-201ENST00000458183 1167 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 RN7SL385P-201ENST00000468873 276 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 NDUFA5P9-201ENST00000472609 340 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC005000.1-201ENST00000536192 288 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC092490.3-201ENST00000545370 572 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC068790.4-201ENST00000602474 263 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC022387.2-201ENST00000604050 448 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC005084.1-201ENST00000605160 304 ntBASIC8.44□□□□□ -1.06
RAPGEF3O95398 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RAPGEF3O95398 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RAPGEF3O95398 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC8.44□□□□□ -1.06
RAPGEF3O95398 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RAPGEF3O95398 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RAPGEF3O95398 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RAPGEF3O95398 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RAPGEF3O95398 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RAPGEF3O95398 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RAPGEF3O95398 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RAPGEF3O95398 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RAPGEF3O95398 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
RAPGEF3O95398 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 RPL7P56-201ENST00000429441 717 ntBASIC8.43□□□□□ -1.06
RAPGEF3O95398 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 AL162739.1-201ENST00000450606 307 ntBASIC8.43□□□□□ -1.06
RAPGEF3O95398 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
RAPGEF3O95398 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 AC004980.4-201ENST00000513375 203 ntBASIC8.43□□□□□ -1.06
RAPGEF3O95398 SETP12-201ENST00000514068 805 ntBASIC8.43□□□□□ -1.06
RAPGEF3O95398 OR4A40P-201ENST00000533878 948 ntBASIC8.43□□□□□ -1.06
RAPGEF3O95398 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC8.43□□□□□ -1.06
RAPGEF3O95398 AC022905.1-201ENST00000503430 3048 ntBASIC8.43□□□□□ -1.06
RAPGEF3O95398 AL359922.2-201ENST00000581788 3017 ntBASIC8.43□□□□□ -1.06
RAPGEF3O95398 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
RAPGEF3O95398 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RAPGEF3O95398 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RAPGEF3O95398 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RAPGEF3O95398 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 NBPF8-201ENST00000583271 5330 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 PWAR1-201ENST00000624188 2414 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 OR55B1P-203ENST00000641518 2602 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 AL359195.2-201ENST00000623657 4412 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RAPGEF3O95398 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RAPGEF3O95398 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RAPGEF3O95398 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 RNU6-891P-201ENST00000384280 111 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 TEX41-205ENST00000431734 529 ntTSL 4 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 DUTP1-201ENST00000493631 470 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 AC021733.2-201ENST00000518830 497 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 HMGB1P40-201ENST00000525121 540 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 DPPA3P2-202ENST00000557188 1219 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 AC095055.1-201ENST00000603472 1113 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 AC114876.1-201ENST00000490962 1366 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RAPGEF3O95398 CASC19-205ENST00000641013 1411 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 INTS6P1-201ENST00000504674 2530 ntBASIC8.42□□□□□ -1.06
RAPGEF3O95398 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RAPGEF3O95398 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
RAPGEF3O95398 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
RAPGEF3O95398 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RAPGEF3O95398 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.41□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms