Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.65
UPK1BO75841 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
UPK1BO75841 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1BO75841 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1BO75841 RNU1-5P-201ENST00000362684 144 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 RPSAP44-201ENST00000406712 884 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 AC024937.2-201ENST00000411669 1242 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 RPL35AP3-201ENST00000414680 288 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.71□□□□□ -1.66
UPK1BO75841 AC013268.2-201ENST00000420753 337 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.71□□□□□ -1.66
UPK1BO75841 AC124944.2-201ENST00000429866 1242 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1BO75841 NPM1P48-201ENST00000436002 853 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC4.71□□□□□ -1.66
UPK1BO75841 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC4.71□□□□□ -1.66
UPK1BO75841 MTND6P5-201ENST00000448266 512 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 AL445466.1-201ENST00000448432 357 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.71□□□□□ -1.66
UPK1BO75841 RPL5P15-201ENST00000475870 897 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 AC093827.1-201ENST00000480094 861 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1BO75841 CR383658.1-201ENST00000514609 734 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.71□□□□□ -1.66
UPK1BO75841 AC022360.1-201ENST00000521058 340 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.71□□□□□ -1.66
UPK1BO75841 OR8G3P-201ENST00000533406 921 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.71□□□□□ -1.66
UPK1BO75841 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.71□□□□□ -1.66
UPK1BO75841 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.71□□□□□ -1.66
UPK1BO75841 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.71□□□□□ -1.66
UPK1BO75841 MIR5705-201ENST00000579870 89 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 RN7SL664P-201ENST00000584239 305 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1BO75841 AC090607.5-201ENST00000615692 224 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1BO75841 AL512356.3-201ENST00000623005 461 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1BO75841 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
UPK1BO75841 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1BO75841 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1BO75841 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1BO75841 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1BO75841 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1BO75841 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
UPK1BO75841 DDX18P4-201ENST00000511690 1966 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.71□□□□□ -1.66
UPK1BO75841 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
UPK1BO75841 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
UPK1BO75841 AC000123.3-201ENST00000624029 4975 ntBASIC4.71□□□□□ -1.66
UPK1BO75841 MT-RNR2-201ENST00000387347 1559 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.7□□□□□ -1.66
UPK1BO75841 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 RPS3A-201ENST00000274065 934 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.7□□□□□ -1.66
UPK1BO75841 MIR128-2-201ENST00000384893 84 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 AC026310.1-201ENST00000396004 378 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 AL009179.1-201ENST00000406085 265 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 AL357752.1-201ENST00000412817 349 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.7□□□□□ -1.66
UPK1BO75841 PTPN2P1-201ENST00000423212 1072 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.7□□□□□ -1.66
UPK1BO75841 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC4.7□□□□□ -1.66
UPK1BO75841 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.7□□□□□ -1.66
UPK1BO75841 AC090686.1-201ENST00000481577 749 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 AC099521.1-201ENST00000482557 334 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 AC073610.1-201ENST00000489971 396 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 TMEM150C-203ENST00000508701 566 ntTSL 4 BASIC4.7□□□□□ -1.66
UPK1BO75841 TCP11X3P-202ENST00000514289 1254 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 RFPL4AP5-201ENST00000514977 504 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 RN7SKP5-201ENST00000517045 272 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC4.7□□□□□ -1.66
UPK1BO75841 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
UPK1BO75841 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.7□□□□□ -1.66
UPK1BO75841 AC009021.1-201ENST00000566098 375 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 WBP1LP11-201ENST00000586141 328 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
UPK1BO75841 AC013489.3-201ENST00000623274 517 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 OR51C1P-202ENST00000641159 1444 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.7□□□□□ -1.66
UPK1BO75841 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
UPK1BO75841 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.7□□□□□ -1.66
UPK1BO75841 SALL4P2-201ENST00000423288 2910 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms