Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LMX1BO60663 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 SNORA21-201ENST00000362423 132 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 U3.10-201ENST00000364459 214 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 SNRPEP6-201ENST00000407465 277 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 MYL6P5-201ENST00000412707 459 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 RPS7P8-201ENST00000418311 581 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 RPL35AP31-201ENST00000418340 337 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.16□□□□□ -1.58
LMX1BO60663 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.16□□□□□ -1.58
LMX1BO60663 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.16□□□□□ -1.58
LMX1BO60663 MTATP6P17-201ENST00000431030 672 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.16□□□□□ -1.58
LMX1BO60663 RPS12P17-201ENST00000438591 377 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 KRT8P51-201ENST00000438938 274 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 AL691517.1-201ENST00000440833 1235 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 RPL12P39-201ENST00000455456 496 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 OSTCP1-201ENST00000455507 450 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 LDHBP2-201ENST00000456969 1005 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 AL603882.1-201ENST00000463059 681 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 AC011476.1-201ENST00000466725 307 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 CR383658.1-201ENST00000514609 734 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 AC078899.1-201ENST00000521432 1185 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 OR56A7P-201ENST00000524865 941 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 AC090424.1-201ENST00000535243 736 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 AC079600.1-201ENST00000550326 297 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.16□□□□□ -1.58
LMX1BO60663 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.16□□□□□ -1.58
LMX1BO60663 LINC00557-201ENST00000563184 1279 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.16□□□□□ -1.58
LMX1BO60663 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.16□□□□□ -1.58
LMX1BO60663 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.16□□□□□ -1.58
LMX1BO60663 AC090236.2-201ENST00000587933 1101 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 AL645933.2-201ENST00000606743 1207 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 AL355974.3-201ENST00000617383 467 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 MIR6826-201ENST00000617808 98 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 AC006453.5-201ENST00000636451 619 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 HSPA8P19-201ENST00000505359 1517 ntBASIC5.16□□□□□ -1.58
LMX1BO60663 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
LMX1BO60663 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LMX1BO60663 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LMX1BO60663 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LMX1BO60663 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.15□□□□□ -1.58
LMX1BO60663 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LMX1BO60663 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.15□□□□□ -1.58
LMX1BO60663 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
LMX1BO60663 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.15□□□□□ -1.58
LMX1BO60663 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.15□□□□□ -1.58
LMX1BO60663 OR52B3P-201ENST00000314715 928 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.15□□□□□ -1.59
LMX1BO60663 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.15□□□□□ -1.59
LMX1BO60663 RSL24D1P1-201ENST00000404972 493 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 RNU6-564P-201ENST00000410983 104 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.15□□□□□ -1.59
LMX1BO60663 MTCO1P57-201ENST00000432182 261 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.15□□□□□ -1.59
LMX1BO60663 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.15□□□□□ -1.59
LMX1BO60663 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.15□□□□□ -1.59
LMX1BO60663 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.15□□□□□ -1.59
LMX1BO60663 AC104164.1-201ENST00000460282 590 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 RN7SL717P-201ENST00000478343 297 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 RN7SL273P-201ENST00000481561 299 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.15□□□□□ -1.59
LMX1BO60663 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 Y_RNA.667-201ENST00000516212 107 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 RNA5SP438-201ENST00000516561 112 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.15□□□□□ -1.59
LMX1BO60663 AC021733.2-201ENST00000518830 497 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.15□□□□□ -1.59
LMX1BO60663 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.15□□□□□ -1.59
LMX1BO60663 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AP001372.4-201ENST00000524889 472 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.15□□□□□ -1.59
LMX1BO60663 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 AC090022.1-201ENST00000546569 311 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms