Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1AO00322 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1AO00322 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1AO00322 LSM3P2-201ENST00000551246 273 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1AO00322 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.26□□□□□ -1.57
UPK1AO00322 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1AO00322 MIR4311-201ENST00000580794 100 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 AL365181.4-201ENST00000609800 547 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.26□□□□□ -1.57
UPK1AO00322 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.26□□□□□ -1.57
UPK1AO00322 OR8A1-204ENST00000642111 1145 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
UPK1AO00322 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
UPK1AO00322 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 ADAM5-202ENST00000399789 1942 ntBASIC5.26□□□□□ -1.57
UPK1AO00322 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.26□□□□□ -1.57
UPK1AO00322 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
UPK1AO00322 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
UPK1AO00322 AC091305.2-201ENST00000624049 1576 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
UPK1AO00322 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.25□□□□□ -1.57
UPK1AO00322 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1AO00322 AC023490.2-201ENST00000359859 470 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1AO00322 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.25□□□□□ -1.57
UPK1AO00322 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.25□□□□□ -1.57
UPK1AO00322 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.25□□□□□ -1.57
UPK1AO00322 AC073465.2-201ENST00000440938 498 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 AL596266.1-201ENST00000448132 400 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 GAPDHP14-201ENST00000450472 937 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 AL445665.1-202ENST00000452436 324 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 AZGP1P2-201ENST00000454506 345 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 NXT1P1-201ENST00000458481 316 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 ABCC13-202ENST00000463099 3842 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 AC087672.1-201ENST00000479876 766 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 ATP5LP5-201ENST00000483050 299 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1AO00322 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.25□□□□□ -1.57
UPK1AO00322 PMS2P3-207ENST00000529061 717 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.25□□□□□ -1.57
UPK1AO00322 AC079600.1-201ENST00000550326 297 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.25□□□□□ -1.57
UPK1AO00322 AP001496.3-201ENST00000580230 913 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.25□□□□□ -1.57
UPK1AO00322 AL356608.1-201ENST00000610034 820 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.25□□□□□ -1.57
UPK1AO00322 AL390318.1-201ENST00000624564 687 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 FRG1EP-201ENST00000634469 770 ntBASIC5.25□□□□□ -1.57
UPK1AO00322 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.25□□□□□ -1.57
UPK1AO00322 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
UPK1AO00322 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1AO00322 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1AO00322 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1AO00322 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.25□□□□□ -1.57
UPK1AO00322 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UPK1AO00322 AC003985.2-201ENST00000562268 1669 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1AO00322 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1AO00322 SRRM1P3-201ENST00000426911 2678 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
UPK1AO00322 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1AO00322 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1AO00322 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1AO00322 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1AO00322 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1AO00322 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1AO00322 AC092681.1-201ENST00000297369 291 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1AO00322 RNA5SP131-201ENST00000365452 119 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 RMRPP5-201ENST00000411156 267 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1AO00322 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.24□□□□□ -1.57
UPK1AO00322 AC117434.1-201ENST00000419971 836 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1AO00322 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.24□□□□□ -1.57
UPK1AO00322 MORF4L2P1-201ENST00000503761 858 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1AO00322 RNU6-615P-201ENST00000516065 106 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 IGKV2-4-201ENST00000523070 340 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.24□□□□□ -1.57
UPK1AO00322 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.24□□□□□ -1.57
UPK1AO00322 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
UPK1AO00322 HMGN2P47-201ENST00000559378 272 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.24□□□□□ -1.57
UPK1AO00322 OR7A8P-201ENST00000595427 913 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 AC027243.2-201ENST00000602530 724 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 LSM1P2-201ENST00000604911 322 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 MIR1910-201ENST00000636955 80 ntBASIC5.24□□□□□ -1.57
UPK1AO00322 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1AO00322 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
UPK1AO00322 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1AO00322 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.24□□□□□ -1.57
UPK1AO00322 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPK1AO00322 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms