Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PRUNEP1-201ENST00000425846 705 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 MRPL50P1-201ENST00000431951 384 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 RPL23AP19-201ENST00000436229 369 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC114728.1-201ENST00000488289 483 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 PSMA2P2-201ENST00000504319 686 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC079600.1-201ENST00000550326 297 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AL049838.1-201ENST00000563647 981 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC141002.1-201ENST00000607025 279 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AP001033.2-201ENST00000609701 1003 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC087683.2-201ENST00000611384 326 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 MIR6793-201ENST00000612376 63 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AL137067.2-201ENST00000621202 131 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AL136228.1-201ENST00000622221 319 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AC013437.2-201ENST00000639587 677 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 AP005432.1-201ENST00000580891 3485 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 UGT2B27P-201ENST00000505092 1620 ntBASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
CTDP1Q9Y5B0 CR382285.2-201ENST00000624662 1495 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AL359091.1-201ENST00000449048 1734 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 GNL2P1-201ENST00000451274 2190 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 RNA5SP284-201ENST00000384547 118 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC104843.2-201ENST00000427666 297 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AL391987.1-201ENST00000441025 200 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC009237.1-201ENST00000442127 744 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AL445466.1-201ENST00000448432 357 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 MORF4L1P4-201ENST00000450245 976 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 NXT1P1-201ENST00000458481 316 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC007998.1-201ENST00000474156 672 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 PPIAP19-201ENST00000486414 492 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 BOLA3P3-201ENST00000505182 232 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 MTND2P32-201ENST00000521584 1038 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC010547.7-201ENST00000570323 333 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 NPIPB1P-202ENST00000588786 828 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AL445435.1-201ENST00000604232 665 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC025811.1-201ENST00000604312 472 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 CYCSP1-201ENST00000604815 315 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC004808.1-201ENST00000627671 721 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 AC099654.8-201ENST00000637757 681 ntBASIC7.04□□□□□ -1.28
CTDP1Q9Y5B0 TMEM30CP-203ENST00000637814 1035 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms