Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 EIF4EP3-201ENST00000498782 656 ntBASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AC098591.2-201ENST00000510152 315 ntBASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AC018797.3-201ENST00000513388 1241 ntBASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 IGLV7-35-201ENST00000523314 340 ntBASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 GTF2IP11-201ENST00000526931 420 ntBASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 ATP1B3P1-201ENST00000605365 821 ntBASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 C20orf78-202ENST00000623418 606 ntTSL 2 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 LINC00604-202ENST00000637924 684 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 AL359854.1-201ENST00000614203 1594 ntBASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
VPS9D1Q9Y2B5 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 MRPS17P1-201ENST00000596009 3130 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 TNNT3-202ENST00000344578 794 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 TNNT3-205ENST00000381563 844 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 RNU6-456P-201ENST00000384493 107 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 TRBV7-5-201ENST00000390382 345 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 TNNT3-209ENST00000397304 720 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AL136116.1-201ENST00000403591 381 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 FANCL-204ENST00000403676 849 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 CHEK2P3-201ENST00000416118 248 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 TMBIM7P-201ENST00000418074 855 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AC008496.2-201ENST00000421252 460 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AL953862.1-201ENST00000423016 168 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 PTPN2P1-201ENST00000423212 1072 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 ARL5AP4-201ENST00000430731 512 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 TNNT3-210ENST00000446240 720 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 SUMO2P10-201ENST00000452006 288 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 RPSAP54-201ENST00000454001 886 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 RN7SL218P-201ENST00000464637 299 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 RN7SL745P-201ENST00000484900 299 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AC015911.1-201ENST00000495111 156 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 SNORA48.10-201ENST00000516965 160 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AC022868.1-201ENST00000517767 391 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AP001189.2-201ENST00000527320 189 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 BNIP3P6-201ENST00000549284 499 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 NF1P12-201ENST00000549593 583 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 MIR4266-201ENST00000583300 55 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AC010327.2-201ENST00000587647 488 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 TNNT3-218ENST00000641787 924 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 LGSN-201ENST00000370657 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 LDAH-201ENST00000237822 2907 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 GOLGA8B-202ENST00000438958 4252 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AC006378.2-201ENST00000623178 2476 ntBASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 KANSL2-201ENST00000420613 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 DCX-201ENST00000356220 3019 ntAPPRIS ALT1 TSL 5 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
VPS9D1Q9Y2B5 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VPS9D1Q9Y2B5 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms