Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 EIF4G3-202ENST00000356916 2179 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
LHX6Q9UPM6 AC092279.2-201ENST00000623742 2189 ntBASIC8.2□□□□□ -1.1
LHX6Q9UPM6 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 ZNF234-204ENST00000592437 2292 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AL033381.1-201ENST00000314040 3435 ntTSL 2 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 ADAMTS9-AS1-206ENST00000493124 1511 ntTSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC018682.1-201ENST00000506009 1519 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 F11-202ENST00000264692 1916 ntTSL 2 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 SRPK1-205ENST00000423325 4357 ntTSL 2 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 COL25A1-208ENST00000610288 4799 ntTSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 CLDN16-201ENST00000264734 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 ADNP-204ENST00000396032 4581 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RPL10P16-201ENST00000325000 645 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 Y_RNA.46-201ENST00000362695 102 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RNU1-8P-201ENST00000384328 165 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RNU6-452P-201ENST00000384406 107 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RNU6-606P-201ENST00000384721 111 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 MIR1-2-201ENST00000384961 85 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 MIR106B-201ENST00000385301 82 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AL096800.1-201ENST00000405326 893 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC093107.1-201ENST00000422772 609 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC083862.1-201ENST00000427378 1242 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RPL23AP30-201ENST00000432419 501 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 GTF2F2P2-201ENST00000445825 721 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 ARL2BPP7-201ENST00000446421 490 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RPL7P14-201ENST00000449851 741 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RPL37P3-201ENST00000456825 293 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 PRELID3BP1-201ENST00000457142 540 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 SNORD127-201ENST00000458892 86 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RNU7-66P-201ENST00000459469 62 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RPL7P17-201ENST00000470927 724 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC097263.1-201ENST00000496795 606 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC106798.1-202ENST00000506819 589 ntTSL 4 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 MTCO3P44-201ENST00000510977 541 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 Y_RNA.700-201ENST00000516806 100 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC027309.2-201ENST00000520566 192 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 FAU-203ENST00000525297 355 ntTSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC120498.6-201ENST00000564700 338 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC027796.5-201ENST00000573568 560 ntTSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 MIR4793-201ENST00000577502 87 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 MIR4790-201ENST00000577799 79 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 RN7SL697P-201ENST00000582484 299 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC090241.1-201ENST00000587732 621 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 FXYD6P1-201ENST00000604857 285 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC074029.3-201ENST00000618623 312 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 AC010615.1-201ENST00000594254 1764 ntBASIC8.19□□□□□ -1.1
LHX6Q9UPM6 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 PDE4D-207ENST00000405755 2294 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 HEATR6-203ENST00000585976 3288 ntTSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 HEATR6-212ENST00000613428 3287 ntTSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 LINC01555-201ENST00000370624 2884 ntTSL 2 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 MTRF1-202ENST00000379477 1948 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
LHX6Q9UPM6 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 SPATA2P1-201ENST00000431223 2055 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC074281.1-201ENST00000436419 2081 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC095038.1-201ENST00000429248 1591 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 LINC01588-202ENST00000528300 3208 ntTSL 2 BASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC073349.2-201ENST00000427545 1603 ntBASIC8.18□□□□□ -1.1
LHX6Q9UPM6 AC005592.1-201ENST00000566527 1640 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms