Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 uc_338.26-201ENST00000612659 160 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 RFPL4AP6-201ENST00000616792 846 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC245014.3-201ENST00000618589 347 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC009269.6-201ENST00000621778 588 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 SNX18P12-201ENST00000624821 759 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 AC093671.1-201ENST00000624981 2929 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 THAP12P9-201ENST00000503971 2360 ntBASIC6.16□□□□□ -1.42
USP29Q9HBJ7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
USP29Q9HBJ7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 SUGT1P2-201ENST00000379452 992 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 GCNT6-201ENST00000379591 934 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 RN7SKP206-201ENST00000410823 293 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 RPL12P12-201ENST00000424633 501 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 MRPS21P2-201ENST00000424704 264 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC073410.1-201ENST00000435125 589 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC016027.4-201ENST00000450866 277 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 TVP23BP2-201ENST00000455082 615 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 NXT1P1-201ENST00000458481 316 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC135999.1-201ENST00000478962 479 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC110760.3-202ENST00000515177 371 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 RN7SKP288-201ENST00000516227 268 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 snoU109.5-201ENST00000516231 132 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 OR56A7P-201ENST00000524865 941 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC079905.1-201ENST00000549280 475 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC023158.1-201ENST00000561632 1025 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 ABI1P1-201ENST00000603375 1120 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AL645933.2-201ENST00000606743 1207 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AL445493.3-201ENST00000619568 477 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC074276.2-201ENST00000619891 348 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
USP29Q9HBJ7 MAPK10-350ENST00000641777 965 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 AL513548.1-201ENST00000562904 1724 ntBASIC6.15□□□□□ -1.42
USP29Q9HBJ7 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 AL929601.4-201ENST00000613011 1341 ntBASIC6.15□□□□□ -1.43
USP29Q9HBJ7 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 RBMY1HP-201ENST00000382759 1389 ntBASIC6.15□□□□□ -1.43
USP29Q9HBJ7 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.15□□□□□ -1.43
USP29Q9HBJ7 AC130360.2-201ENST00000533477 1556 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 OR10R3P-201ENST00000361688 942 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 SNORA72.3-201ENST00000365074 132 ntBASIC6.14□□□□□ -1.43
USP29Q9HBJ7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
USP29Q9HBJ7 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms