Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AC016745.2-201ENST00000608834 3443 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AC125336.1-201ENST00000508893 2827 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 NEPNP-201ENST00000404786 1371 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 RPS6P23-201ENST00000413224 722 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AL034379.1-201ENST00000423216 253 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AL354766.1-201ENST00000423396 542 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 NANOGP9-201ENST00000439890 892 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 LINC02210-201ENST00000444561 288 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 RPS3AP15-201ENST00000483874 781 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 RFPL4AP3-201ENST00000515267 345 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 SNORA70.20-201ENST00000516848 126 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 TOMM20P1-201ENST00000534518 427 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AC122688.1-201ENST00000541494 223 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AC063977.5-201ENST00000601044 974 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AC087468.1-201ENST00000604365 630 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 CDC27P2-201ENST00000425026 1922 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 PWAR1-201ENST00000624188 2414 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 CR383656.5-201ENST00000547616 1340 ntBASIC5.73□□□□□ -1.49
LRRC40Q9H9A6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 CR382285.2-201ENST00000624662 1495 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 NPM1P18-201ENST00000434232 732 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 DUTP7-201ENST00000507982 486 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 HSPE1P2-201ENST00000554777 306 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 AC067773.1-201ENST00000603284 1094 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 AC007786.3-201ENST00000615154 596 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 RN7SL544P-201ENST00000617232 284 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 RN7SL763P-201ENST00000620922 284 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 MTCO1P7-201ENST00000419523 1542 ntBASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.72□□□□□ -1.49
LRRC40Q9H9A6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
LRRC40Q9H9A6 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
LRRC40Q9H9A6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
LRRC40Q9H9A6 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LRRC40Q9H9A6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 AC092681.1-201ENST00000297369 291 ntBASIC5.71□□□□□ -1.5
LRRC40Q9H9A6 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms