Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AF287957.1-201ENST00000607368 1595 ntBASIC5.86□□□□□ -1.47
TRIM4Q9C037 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM4Q9C037 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM4Q9C037 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM4Q9C037 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC073410.1-201ENST00000435125 589 ntBASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC023141.3-201ENST00000436698 278 ntBASIC5.86□□□□□ -1.47
TRIM4Q9C037 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AL163193.1-201ENST00000444895 788 ntBASIC5.86□□□□□ -1.47
TRIM4Q9C037 MORF4L1P4-201ENST00000450245 976 ntBASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC011476.1-201ENST00000466725 307 ntBASIC5.86□□□□□ -1.47
TRIM4Q9C037 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC010343.2-201ENST00000510162 224 ntBASIC5.86□□□□□ -1.47
TRIM4Q9C037 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 RNA5SP438-201ENST00000516561 112 ntBASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC018445.2-201ENST00000622987 260 ntBASIC5.86□□□□□ -1.47
TRIM4Q9C037 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.86□□□□□ -1.47
TRIM4Q9C037 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRIM4Q9C037 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.86□□□□□ -1.47
TRIM4Q9C037 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM4Q9C037 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM4Q9C037 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM4Q9C037 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 AC104260.2-201ENST00000623551 3497 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM4Q9C037 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 CR383656.5-201ENST00000547616 1340 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM4Q9C037 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM4Q9C037 RNA5SP110-201ENST00000362638 115 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 SNORA43.1-201ENST00000364863 140 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM4Q9C037 NACAP7-201ENST00000407371 609 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 DPPA2P3-201ENST00000411853 655 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 EEF1B2P8-201ENST00000414101 671 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 HSPE1P16-201ENST00000426640 348 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 ELOCP3-201ENST00000439303 348 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 AP000281.1-201ENST00000444036 316 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 AC073072.2-201ENST00000447425 348 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 AC112187.1-201ENST00000455837 479 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 RANP2-201ENST00000456833 229 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 AC095052.1-201ENST00000509955 863 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 PRMT5P1-201ENST00000514351 598 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 AC036111.2-201ENST00000533247 901 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 AC007956.1-201ENST00000555623 542 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 RNU4ATAC-201ENST00000580972 127 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 AC010998.3-201ENST00000613871 631 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 RFPL4AP6-201ENST00000616792 846 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM4Q9C037 AC116667.2-201ENST00000641075 823 ntBASIC5.85□□□□□ -1.47
TRIM4Q9C037 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM4Q9C037 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM4Q9C037 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM4Q9C037 TCP1P3-201ENST00000414406 1498 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM4Q9C037 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM4Q9C037 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM4Q9C037 RN7SKP162-201ENST00000363605 345 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM4Q9C037 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 AL627308.1-201ENST00000435693 821 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 PTMAP6-201ENST00000439110 327 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 SOCS5P1-201ENST00000440415 949 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 AC064862.4-201ENST00000442180 334 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 GAPDHP23-201ENST00000444823 993 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms