Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC078909.2-201ENST00000620584 398 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AC025287.2-201ENST00000621911 668 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AL049541.2-201ENST00000626377 555 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AC011471.4-201ENST00000638271 216 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AL356585.10-201ENST00000641883 123 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AL731556.1-201ENST00000394628 3711 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AL359091.1-201ENST00000449048 1734 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AC093311.1-201ENST00000506586 2021 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AL354854.1-201ENST00000455940 1363 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 AC007996.1-201ENST00000620414 2821 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
TRIM55Q9BYV6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC000367.1-201ENST00000452711 1766 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 NACA3P-201ENST00000359690 648 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 PPIAP26-201ENST00000377951 522 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 SNORA11.5-201ENST00000408163 128 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 MYO5BP3-201ENST00000431872 1279 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC234064.1-201ENST00000436312 247 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 RPS26P30-201ENST00000443431 335 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 RPL31P44-201ENST00000447680 377 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 MYO5BP2-201ENST00000449815 1277 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 GOT2P2-201ENST00000450663 1251 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 OR7E7P-201ENST00000455678 1012 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 RPS4XP17-201ENST00000479057 754 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC091544.1-201ENST00000484702 348 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC021193.1-201ENST00000511607 420 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 SCARNA18.2-201ENST00000516882 84 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 RPL3P13-201ENST00000550415 216 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AL442163.2-201ENST00000553912 710 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 SETP1-201ENST00000556014 845 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 RPS7P1-201ENST00000571702 585 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 RN7SL199P-201ENST00000578752 281 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 RN7SL656P-201ENST00000579044 281 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 MIR5708-201ENST00000579723 85 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC022662.1-201ENST00000580252 331 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 RN7SL404P-201ENST00000582421 281 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AL109653.1-201ENST00000603091 248 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 BNIP3P4-201ENST00000604946 565 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AC010245.2-201ENST00000606908 1167 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 AL360219.1-201ENST00000610230 366 ntBASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM55Q9BYV6 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms