Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC007346.1-201ENST00000569208 867 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 AC009237.13-201ENST00000603193 276 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 MIR6885-201ENST00000612241 66 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 FAM27E2-201ENST00000619668 403 ntBASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CCDC28BQ9BUN5 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AL359715.3-201ENST00000569267 2123 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AF287957.1-201ENST00000607368 1595 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 MIR431-201ENST00000385266 114 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AL035422.1-201ENST00000414193 397 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 OR13Z1P-201ENST00000416141 834 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 RPEP4-201ENST00000437636 602 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 NPM1P33-201ENST00000438918 872 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AL353662.1-201ENST00000439099 327 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AL157385.1-201ENST00000446973 268 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC091917.2-201ENST00000505002 744 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC016559.2-201ENST00000510759 359 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 GAPDHP71-201ENST00000511530 1003 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 HMGN1P17-201ENST00000513734 295 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC139365.2-201ENST00000517972 253 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 PMS2P3-207ENST00000529061 717 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC005244.1-201ENST00000582566 339 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AL354950.1-201ENST00000614150 568 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC091932.2-201ENST00000623014 291 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC008627.1-201ENST00000517511 1704 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 AC099654.3-201ENST00000447087 1546 ntBASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC28BQ9BUN5 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AC011447.7-201ENST00000624228 1590 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 RNA5SP241-201ENST00000391326 114 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AL357752.1-201ENST00000412817 349 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 FTLP19-201ENST00000433300 394 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AL022324.2-201ENST00000434827 780 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 TUBB4BP6-201ENST00000437576 479 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 GTF3AP5-201ENST00000442645 697 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AL596266.1-201ENST00000448132 400 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AZGP1P2-201ENST00000454506 345 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 RN7SL570P-201ENST00000484405 292 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 RN7SL591P-201ENST00000496150 292 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AC021106.1-201ENST00000509020 1058 ntBASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.47□□□□□ -1.53
CCDC28BQ9BUN5 AC108103.1-201ENST00000511286 446 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms