Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC022919.1-201ENST00000624979 626 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDLIM5Q96HC4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC097063.1-201ENST00000426714 1797 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AL137141.1-201ENST00000624622 4836 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 RNA5SP105-201ENST00000391123 113 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AL357752.1-201ENST00000412817 349 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 MRPL53P1-201ENST00000414323 319 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AL035660.1-201ENST00000422041 222 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AL354766.1-201ENST00000423396 542 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 MRPS21P2-201ENST00000424704 264 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC083899.1-201ENST00000454465 3819 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 Y_RNA.667-201ENST00000516212 107 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 RNA5SP438-201ENST00000516561 112 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC139697.1-201ENST00000548429 745 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 DHFRP1-201ENST00000579682 559 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 MIR7109-201ENST00000613748 65 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC129778.1-202ENST00000623812 261 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC073592.6-201ENST00000624271 415 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AL591379.1-207ENST00000635982 261 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC099654.6-201ENST00000636487 512 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDLIM5Q96HC4 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 MIR133A2-201ENST00000347538 102 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 MIR130A-201ENST00000385274 89 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC004386.1-201ENST00000393214 761 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 OR7E101P-201ENST00000400428 513 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 MIR1203-201ENST00000408812 85 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AK4P4-201ENST00000419465 646 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 OR5W1P-201ENST00000423705 938 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC126120.1-201ENST00000431082 470 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 TPTE2P1-204ENST00000435256 593 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 RPL31P53-201ENST00000457065 348 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC026782.2-201ENST00000510845 636 ntBASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.62□□□□□ -1.51
PDLIM5Q96HC4 RNA5SP473-201ENST00000516402 125 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms