Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC073488.6-201ENST00000632293 754 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AC239868.2-201ENST00000564237 4527 ntBASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
ATG4AQ8WYN0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 PSG10P-201ENST00000501199 1500 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC027279.4-201ENST00000624371 2072 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 FBXL21-201ENST00000297158 1305 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 RNA5SP514-201ENST00000363717 111 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC098592.2-201ENST00000413158 265 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 RPL7AP14-201ENST00000424041 802 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC092865.3-201ENST00000425390 1026 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 RPSAP32-201ENST00000432681 526 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 LDHAP2-201ENST00000437325 985 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 TPTE2P3-201ENST00000441562 1189 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 PPIAP7-201ENST00000454070 489 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC016687.1-201ENST00000482574 353 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 RPS3AP6-201ENST00000484430 795 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 SNRPCP11-201ENST00000492453 205 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 RN7SL284P-201ENST00000498823 275 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 OR7E99P-201ENST00000505750 922 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 SOX5P1-201ENST00000524155 1127 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AP001000.1-201ENST00000526843 742 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AP000620.1-201ENST00000527147 504 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC007346.1-201ENST00000569208 867 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 GARSP1-201ENST00000570895 719 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC025857.2-201ENST00000602711 238 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AP001033.2-201ENST00000609701 1003 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 MIR8084-201ENST00000614105 89 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC004801.6-201ENST00000616571 978 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC022400.9-201ENST00000623633 273 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 MFSD8-219ENST00000641228 2559 ntBASIC6.1□□□□□ -1.43
ATG4AQ8WYN0 AC025470.1-201ENST00000510053 2032 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 MFSD8-239ENST00000641590 2479 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC120036.2-201ENST00000509729 1474 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 RN7SKP78-201ENST00000364711 318 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 MTCO2P8-201ENST00000412213 658 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 SEPT7P8-201ENST00000413308 775 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC242426.1-201ENST00000435270 960 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 GAPDHP59-201ENST00000435908 267 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 RAB9AP5-201ENST00000437794 597 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 RAB9AP2-201ENST00000443911 597 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 AC010240.2-201ENST00000445363 1205 ntBASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.09□□□□□ -1.43
ATG4AQ8WYN0 RPS26P41-201ENST00000450370 284 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms