Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 DPPA3P2-202ENST00000557188 1219 ntBASIC7.15□□□□□ -1.26
SYNE4Q8N205 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 AC097478.2-201ENST00000610572 514 ntBASIC7.15□□□□□ -1.26
SYNE4Q8N205 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 OR6C71P-202ENST00000641886 1107 ntBASIC7.15□□□□□ -1.26
SYNE4Q8N205 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SYNE4Q8N205 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.15□□□□□ -1.26
SYNE4Q8N205 AC024341.1-201ENST00000526444 1552 ntBASIC7.15□□□□□ -1.27
SYNE4Q8N205 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.27
SYNE4Q8N205 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
SYNE4Q8N205 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE4Q8N205 DOCK11P1-201ENST00000553480 5932 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE4Q8N205 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE4Q8N205 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 RNA5SP30-201ENST00000365552 115 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE4Q8N205 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE4Q8N205 RN7SKP273-201ENST00000411392 314 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 RPS17P17-201ENST00000419392 409 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 HMGB1P32-201ENST00000425971 565 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 RPL7L1P9-201ENST00000431298 745 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 RPL12P3-201ENST00000440080 396 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 RPS3AP53-201ENST00000454716 778 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 RPL7L1P3-201ENST00000455249 689 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 RN7SL570P-201ENST00000484405 292 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AC090510.2-201ENST00000617465 629 ntBASIC7.14□□□□□ -1.27
SYNE4Q8N205 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE4Q8N205 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SYNE4Q8N205 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SYNE4Q8N205 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE4Q8N205 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE4Q8N205 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE4Q8N205 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE4Q8N205 RNA5SP507-201ENST00000363603 121 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 SNORA72.3-201ENST00000365074 132 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 AP003170.5-201ENST00000397185 335 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 RN7SKP125-201ENST00000410481 302 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 AL590762.4-201ENST00000425885 253 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 RPS26P41-201ENST00000450370 284 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 AL645937.3-201ENST00000453647 936 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 CBX1P5-201ENST00000475330 559 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 RN7SL583P-201ENST00000475692 287 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 RPL7P39-201ENST00000481157 744 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC079841.1-201ENST00000481228 950 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 EIF1P7-201ENST00000487533 337 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 HMGN2P6-201ENST00000551091 273 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC245128.3-201ENST00000594721 748 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 KATNBL1P1-201ENST00000605192 748 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 AC132068.1-201ENST00000623805 459 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 AL034408.1-201ENST00000637712 664 ntBASIC7.13□□□□□ -1.27
SYNE4Q8N205 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE4Q8N205 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE4Q8N205 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE4Q8N205 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SYNE4Q8N205 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SYNE4Q8N205 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE4Q8N205 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE4Q8N205 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SYNE4Q8N205 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SYNE4Q8N205 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms