Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
C9orf40Q8IXQ3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
C9orf40Q8IXQ3 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.21□□□□□ -1.57
C9orf40Q8IXQ3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
C9orf40Q8IXQ3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
C9orf40Q8IXQ3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.21□□□□□ -1.57
C9orf40Q8IXQ3 SAMM50P1-201ENST00000455403 1399 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC005042.1-201ENST00000393397 800 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AL512422.1-201ENST00000407033 553 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 METTL15P3-201ENST00000415522 1221 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AL133173.1-201ENST00000423458 397 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 TNPO1P1-201ENST00000423641 1138 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AL450996.1-201ENST00000445574 1202 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AL450023.1-201ENST00000450868 751 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 VDAC2P4-201ENST00000452925 711 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 RN7SL174P-201ENST00000475578 289 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC137627.1-201ENST00000545761 289 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC022404.1-201ENST00000555320 273 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 SNORD95-201ENST00000579879 68 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 FO393422.1-201ENST00000603908 708 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC104695.2-201ENST00000605056 775 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 PPATP2-201ENST00000605635 508 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC004477.3-201ENST00000614061 590 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC007683.2-201ENST00000624681 714 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AP000473.2-201ENST00000602659 1537 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 AC239868.2-201ENST00000564237 4527 ntBASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
C9orf40Q8IXQ3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 CASC19-260ENST00000641828 2001 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 RN7SKP293-201ENST00000411389 296 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AL354766.1-201ENST00000423396 542 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 OR6C71P-201ENST00000432580 913 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 RPSAP39-201ENST00000467439 883 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 NRBF2P4-201ENST00000520874 850 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 RBM22P12-201ENST00000567098 1255 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 MIR1273E-201ENST00000581165 102 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AC015849.6-201ENST00000605454 474 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 FAM72A-208ENST00000607379 1139 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AC025574.2-201ENST00000615621 514 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AC138627.1-204ENST00000641894 765 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AC087516.1-201ENST00000561236 2428 ntBASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.2□□□□□ -1.58
C9orf40Q8IXQ3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms