Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 CST12P-201ENST00000457644 362 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC005165.2-201ENST00000466070 380 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AL122020.1-201ENST00000472287 459 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 ENPP7P11-201ENST00000505915 627 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 RN7SKP183-201ENST00000517169 324 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC139365.2-201ENST00000517972 253 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC084121.1-201ENST00000533882 835 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AL845552.1-201ENST00000556820 323 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC002310.3-201ENST00000569728 723 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 MIR4260-201ENST00000583107 67 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AP001437.1-201ENST00000608783 456 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC241377.1-201ENST00000619797 406 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 MIR6806-201ENST00000622141 64 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AL138820.1-201ENST00000617901 5305 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 AC011755.1-201ENST00000623763 2049 ntBASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CCDC50Q8IVM0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 LYARP1-201ENST00000436977 1501 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 SNORA70.6-201ENST00000383934 134 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 MRPL53P1-201ENST00000414323 319 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 NIFKP3-201ENST00000417799 865 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 BX284632.2-201ENST00000421091 399 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 GAPDHP48-201ENST00000436626 961 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AL512605.1-202ENST00000441919 381 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AL359955.2-201ENST00000445380 353 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 RN7SL193P-201ENST00000491708 276 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 RBBP4P1-201ENST00000502424 1276 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 DHFRP1-201ENST00000579682 559 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 MIR6780B-201ENST00000610307 79 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.95□□□□□ -1.46
CCDC50Q8IVM0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AL121886.1-201ENST00000358609 435 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 RNA5SP326-201ENST00000363209 110 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 RNU1-65P-201ENST00000363919 148 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC005042.1-201ENST00000393397 800 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 RPS23P9-201ENST00000448848 438 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC074255.1-201ENST00000511259 501 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 Vault.2-201ENST00000516519 98 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 AC079905.1-201ENST00000549280 475 ntBASIC5.94□□□□□ -1.46
CCDC50Q8IVM0 CYCSP38-201ENST00000559840 322 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms