Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MIR2117-201ENST00000516780 80 ntBASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 RNA5SP340-201ENST00000517132 107 ntBASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 AC104997.1-201ENST00000519761 717 ntBASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 AC078899.1-201ENST00000521432 1185 ntBASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 RPA2P1-201ENST00000556557 721 ntBASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 AC004241.3-201ENST00000611728 517 ntBASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 RNA5SP439-201ENST00000617595 124 ntBASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 AC104820.1-201ENST00000624183 307 ntBASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 AP005435.3-201ENST00000531260 3198 ntBASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.28□□□□□ -1.56
NHLRC1Q6VVB1 ADAM24P-201ENST00000398655 2101 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 COX6B1P3-201ENST00000312310 260 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 RNU1-65P-201ENST00000363919 148 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 BTF3P9-201ENST00000418784 283 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 MTCYBP7-201ENST00000419540 1134 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC046176.1-201ENST00000435260 1170 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC096775.1-201ENST00000437724 448 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AL512637.1-201ENST00000439523 1231 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 VN1R48P-201ENST00000448149 1036 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC118758.1-202ENST00000454719 225 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 OSTCP1-201ENST00000455507 450 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 CST12P-201ENST00000457644 362 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC023194.2-201ENST00000465398 406 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 RN7SL193P-201ENST00000491708 276 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 PCNAP1-201ENST00000505363 709 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 PRMT5P1-201ENST00000514351 598 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 EIF4A2P5-201ENST00000529914 499 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC074029.2-201ENST00000551045 634 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC007346.2-201ENST00000564816 892 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 FAM106CP-201ENST00000582212 507 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC008507.3-201ENST00000585753 472 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC090236.2-201ENST00000587933 1101 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AF287957.1-201ENST00000607368 1595 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC006840.1-201ENST00000623069 542 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC026523.2-201ENST00000625039 7739 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC004076.2-201ENST00000620532 3323 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AL355488.2-201ENST00000609909 2850 ntBASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
NHLRC1Q6VVB1 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NHLRC1Q6VVB1 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NHLRC1Q6VVB1 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
NHLRC1Q6VVB1 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms