Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC005042.1-201ENST00000393397 800 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 TUBB4BP6-201ENST00000437576 479 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 RPEP4-201ENST00000437636 602 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 OR52I1-201ENST00000450052 1050 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 PPIAP7-201ENST00000454070 489 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 NXT1P1-201ENST00000458481 316 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 HMGN1P16-201ENST00000508308 283 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC108103.1-201ENST00000511286 446 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AP000620.1-201ENST00000527147 504 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC012368.3-201ENST00000604190 219 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC092681.3-201ENST00000609463 678 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC010632.3-201ENST00000611377 369 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 AC073575.2-201ENST00000614212 627 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 OR11H2-202ENST00000641517 1085 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 CDC27P2-201ENST00000425026 1922 ntBASIC5.03□□□□□ -1.6
CCDC58Q4VC31 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC58Q4VC31 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 MIR431-201ENST00000385266 114 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 MIR130A-201ENST00000385274 89 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AC233289.1-201ENST00000403700 508 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 RIMKLBP2-201ENST00000424737 654 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 NDUFB4P8-201ENST00000435351 367 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 GEMIN2P1-201ENST00000454246 752 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 RPL21P6-201ENST00000479171 504 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 DUTP1-201ENST00000493631 470 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 MAST4-IT1-201ENST00000514241 658 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 PRMT5P1-201ENST00000514351 598 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AP002373.2-201ENST00000541631 1060 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AGGF1P7-201ENST00000562369 913 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 MRPS21P8-201ENST00000569196 235 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AL356608.1-201ENST00000610034 820 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 SMG1P4-204ENST00000523028 4131 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 Z95327.2-201ENST00000414579 1873 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AC112198.2-201ENST00000426589 6996 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 AC079097.1-201ENST00000512187 1399 ntBASIC5.02□□□□□ -1.61
CCDC58Q4VC31 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC58Q4VC31 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms