Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL031985.1-201ENST00000392713 418 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 GAPDHP42-201ENST00000406848 981 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 CDY17P-201ENST00000414121 1282 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 RPL7P56-201ENST00000429441 717 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AC019185.1-201ENST00000442718 389 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AL450996.1-201ENST00000445574 1202 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 OR4A17P-201ENST00000526032 904 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AL049872.1-201ENST00000556323 322 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 H3F3BP2-201ENST00000583907 357 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AC127024.6-201ENST00000621598 424 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AC016542.2-201ENST00000624201 619 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 AL137058.3-201ENST00000624531 3099 ntBASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
PTPN20Q4JDL3 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
PTPN20Q4JDL3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.84□□□□□ -1.48
PTPN20Q4JDL3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 TMSB4XP4-201ENST00000323496 618 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 RNA5SP453-201ENST00000362503 119 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 RNA5SP122-201ENST00000384457 108 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 U3.28-201ENST00000391249 210 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 OR2AT2P-201ENST00000413438 905 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AL158827.1-201ENST00000416300 391 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 NDUFB4P8-201ENST00000435351 367 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC092106.1-201ENST00000444291 373 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 IGBP1P3-201ENST00000447449 1000 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 REG1CP-206ENST00000447469 496 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 LDHBP2-201ENST00000456969 1005 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC074087.1-201ENST00000512059 724 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 NRBF2P4-201ENST00000520874 850 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC112191.2-201ENST00000522428 333 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 RBM22P12-201ENST00000567098 1255 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC012616.1-201ENST00000600294 197 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 RN7SL787P-201ENST00000613000 284 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AL118522.2-201ENST00000616045 615 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 MIR6133-201ENST00000617057 108 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AL157762.1-201ENST00000619612 415 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC103703.1-201ENST00000634783 663 ntBASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PTPN20Q4JDL3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN20Q4JDL3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTPN20Q4JDL3 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms