Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 RPL17P2-201ENST00000491913 451 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AC074255.1-201ENST00000511259 501 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AC126615.2-201ENST00000553003 515 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AL583832.1-201ENST00000603227 784 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AC090607.5-201ENST00000615692 224 ntBASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
SHROOM1Q2M3G4 AL592429.1-201ENST00000403909 1473 ntBASIC6.59□□□□□ -1.36
SHROOM1Q2M3G4 AC018628.1-201ENST00000624147 3819 ntBASIC6.59□□□□□ -1.36
SHROOM1Q2M3G4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SHROOM1Q2M3G4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
SHROOM1Q2M3G4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 MR1-209ENST00000617803 7584 ntTSL 5 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 RNA5SP326-201ENST00000363209 110 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 MIR937-201ENST00000401271 86 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 GAPDHP42-201ENST00000406848 981 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 RNU4-34P-201ENST00000410431 124 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AP000534.2-201ENST00000412729 568 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 GAPDHP58-201ENST00000438477 1006 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AURKAPS1-201ENST00000451805 1212 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AL355032.1-201ENST00000472981 438 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 BX284632.1-201ENST00000478218 541 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 RN7SL826P-201ENST00000479724 288 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AC072052.1-201ENST00000496556 306 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AP006245.2-201ENST00000522004 300 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AC018809.2-201ENST00000602436 3823 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AL512329.2-201ENST00000607350 548 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 CDY11P-201ENST00000447168 1651 ntBASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SHROOM1Q2M3G4 AL442128.2-201ENST00000620246 1824 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AL731532.1-201ENST00000623972 4236 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 RNA5SP335-201ENST00000363817 110 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 SNORA70-201ENST00000384436 135 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AL121835.1-201ENST00000404250 354 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 LINC01687-201ENST00000416327 795 ntTSL 3 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AL365220.1-201ENST00000432923 399 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 RPS23P2-201ENST00000463671 415 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 RN7SL51P-201ENST00000468230 285 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 OR4A46P-201ENST00000527255 933 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AC139697.1-201ENST00000548429 745 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AGGF1P7-201ENST00000562369 913 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 RBM22P1-201ENST00000578589 1214 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AC092944.2-201ENST00000605443 889 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AC024940.4-201ENST00000605507 246 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AC118658.2-201ENST00000618697 459 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 AC008115.4-201ENST00000619780 775 ntBASIC6.57□□□□□ -1.36
SHROOM1Q2M3G4 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms