Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC096708.4-201ENST00000620563 552 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC022400.9-201ENST00000623633 273 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC138907.10-201ENST00000623708 983 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC145207.9-201ENST00000623802 325 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 AC061999.1-201ENST00000624454 177 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX6-1P78426 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX6-1P78426 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX6-1P78426 AC017104.5-201ENST00000637647 639 ntBASIC5.84□□□□□ -1.47
NKX6-1P78426 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.84□□□□□ -1.47
NKX6-1P78426 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
NKX6-1P78426 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
NKX6-1P78426 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NKX6-1P78426 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC5.84□□□□□ -1.48
NKX6-1P78426 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
NKX6-1P78426 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC5.84□□□□□ -1.48
NKX6-1P78426 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC5.84□□□□□ -1.48
NKX6-1P78426 AKAP17BP-201ENST00000431706 2719 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 IFIT1P1-201ENST00000400497 1449 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX6-1P78426 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX6-1P78426 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX6-1P78426 CIR1P2-201ENST00000514821 1342 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 Z97989.1-201ENST00000531702 2421 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
NKX6-1P78426 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX6-1P78426 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NKX6-1P78426 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NKX6-1P78426 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX6-1P78426 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NKX6-1P78426 RNU4-28P-201ENST00000364739 141 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX6-1P78426 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 RNU6-224P-201ENST00000384055 107 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 RNU6-185P-201ENST00000384421 107 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AL035419.1-201ENST00000397037 564 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 PRELID1P1-201ENST00000403549 660 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AL590635.1-201ENST00000406314 586 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 CYCSP17-201ENST00000407870 315 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 RPL22P18-201ENST00000417197 377 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX6-1P78426 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 OR2X1P-201ENST00000421144 687 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX6-1P78426 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX6-1P78426 CACYBPP1-201ENST00000438592 684 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 EMC3-AS1-205ENST00000438698 534 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX6-1P78426 ARAFP2-201ENST00000440565 559 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX6-1P78426 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AC099340.1-201ENST00000475247 599 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 RN7SL413P-201ENST00000482700 297 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AC018797.1-201ENST00000510791 255 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AC119751.1-201ENST00000513357 765 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AC025260.1-201ENST00000548858 430 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AC027104.1-201ENST00000563702 681 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX6-1P78426 RBM22P1-201ENST00000578589 1214 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 RPL29P33-201ENST00000587474 316 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 CCDC58P3-201ENST00000590792 430 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AL352984.2-201ENST00000611153 546 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AC021755.4-201ENST00000616620 456 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 MIR6721-201ENST00000617181 87 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 AC019226.2-201ENST00000625973 424 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.83□□□□□ -1.48
NKX6-1P78426 AC010325.3-201ENST00000641084 394 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 AC073055.1-201ENST00000456901 1621 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NKX6-1P78426 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.83□□□□□ -1.48
NKX6-1P78426 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 OR7A17-202ENST00000641113 3639 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
NKX6-1P78426 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 AL591848.4-201ENST00000567832 3472 ntBASIC5.83□□□□□ -1.48
NKX6-1P78426 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NKX6-1P78426 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms