Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.21□□□□□ -1.42
TPM4P67936 AC073610.1-201ENST00000489971 396 ntBASIC6.21□□□□□ -1.42
TPM4P67936 AL158068.1-201ENST00000506116 616 ntBASIC6.21□□□□□ -1.42
TPM4P67936 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.21□□□□□ -1.42
TPM4P67936 AC091912.1-201ENST00000511351 248 ntBASIC6.21□□□□□ -1.42
TPM4P67936 SCARNA18.1-201ENST00000516330 83 ntBASIC6.21□□□□□ -1.42
TPM4P67936 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.21□□□□□ -1.42
TPM4P67936 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.21□□□□□ -1.42
TPM4P67936 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.21□□□□□ -1.42
TPM4P67936 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.21□□□□□ -1.42
TPM4P67936 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.21□□□□□ -1.42
TPM4P67936 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.21□□□□□ -1.42
TPM4P67936 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.21□□□□□ -1.42
TPM4P67936 FAM27E4-201ENST00000605259 342 ntBASIC6.21□□□□□ -1.42
TPM4P67936 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC6.21□□□□□ -1.42
TPM4P67936 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.21□□□□□ -1.42
TPM4P67936 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.21□□□□□ -1.42
TPM4P67936 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TPM4P67936 MTND5P12-201ENST00000502851 1449 ntBASIC6.21□□□□□ -1.42
TPM4P67936 AC093225.1-201ENST00000506867 1408 ntBASIC6.21□□□□□ -1.42
TPM4P67936 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
TPM4P67936 AC012078.1-201ENST00000405035 1646 ntBASIC6.21□□□□□ -1.42
TPM4P67936 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.21□□□□□ -1.42
TPM4P67936 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
TPM4P67936 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.2□□□□□ -1.42
TPM4P67936 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.2□□□□□ -1.42
TPM4P67936 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
TPM4P67936 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.2□□□□□ -1.42
TPM4P67936 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
TPM4P67936 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TPM4P67936 AC011755.1-201ENST00000623763 2049 ntBASIC6.2□□□□□ -1.42
TPM4P67936 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
TPM4P67936 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
TPM4P67936 AC022306.1-201ENST00000560489 1562 ntBASIC6.2□□□□□ -1.42
TPM4P67936 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
TPM4P67936 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TPM4P67936 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.2□□□□□ -1.42
TPM4P67936 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.2□□□□□ -1.42
TPM4P67936 SNORA48.4-201ENST00000391089 134 ntBASIC6.2□□□□□ -1.42
TPM4P67936 YWHAZP6-201ENST00000399764 738 ntBASIC6.2□□□□□ -1.42
TPM4P67936 AL009179.1-201ENST00000406085 265 ntBASIC6.2□□□□□ -1.42
TPM4P67936 RPL7AP49-201ENST00000429522 581 ntBASIC6.2□□□□□ -1.42
TPM4P67936 AL591438.1-201ENST00000433508 581 ntBASIC6.2□□□□□ -1.42
TPM4P67936 AL358876.1-201ENST00000453364 1075 ntBASIC6.2□□□□□ -1.42
TPM4P67936 RPS26P24-201ENST00000497656 331 ntBASIC6.2□□□□□ -1.42
TPM4P67936 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.2□□□□□ -1.42
TPM4P67936 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.2□□□□□ -1.42
TPM4P67936 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.2□□□□□ -1.42
TPM4P67936 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.2□□□□□ -1.42
TPM4P67936 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.2□□□□□ -1.42
TPM4P67936 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.2□□□□□ -1.42
TPM4P67936 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.2□□□□□ -1.42
TPM4P67936 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.2□□□□□ -1.42
TPM4P67936 MIR6809-201ENST00000612189 116 ntBASIC6.2□□□□□ -1.42
TPM4P67936 AC091932.2-201ENST00000623014 291 ntBASIC6.2□□□□□ -1.42
TPM4P67936 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TPM4P67936 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.2□□□□□ -1.42
TPM4P67936 AL078621.3-201ENST00000623707 2042 ntBASIC6.2□□□□□ -1.42
TPM4P67936 SMG1P4-204ENST00000523028 4131 ntBASIC6.19□□□□□ -1.42
TPM4P67936 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
TPM4P67936 PPIAP9-201ENST00000403866 498 ntBASIC6.19□□□□□ -1.42
TPM4P67936 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.19□□□□□ -1.42
TPM4P67936 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.19□□□□□ -1.42
TPM4P67936 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.19□□□□□ -1.42
TPM4P67936 AC016772.1-201ENST00000444170 1261 ntBASIC6.19□□□□□ -1.42
TPM4P67936 RBMY2AP-201ENST00000445405 1157 ntBASIC6.19□□□□□ -1.42
TPM4P67936 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.19□□□□□ -1.42
TPM4P67936 RBMY2CP-201ENST00000448575 1157 ntBASIC6.19□□□□□ -1.42
TPM4P67936 RBMY2DP-202ENST00000448881 1157 ntBASIC6.19□□□□□ -1.42
TPM4P67936 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.19□□□□□ -1.42
TPM4P67936 RBMY2BP-202ENST00000451071 1156 ntBASIC6.19□□□□□ -1.42
TPM4P67936 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 RPL32P33-201ENST00000487023 394 ntBASIC6.19□□□□□ -1.42
TPM4P67936 ENPP7P11-201ENST00000505915 627 ntBASIC6.19□□□□□ -1.42
TPM4P67936 DUTP7-201ENST00000507982 486 ntBASIC6.19□□□□□ -1.42
TPM4P67936 AC021106.1-201ENST00000509020 1058 ntBASIC6.19□□□□□ -1.42
TPM4P67936 AC021678.3-201ENST00000517893 476 ntBASIC6.19□□□□□ -1.42
TPM4P67936 CDC42P3-201ENST00000518493 633 ntBASIC6.19□□□□□ -1.42
TPM4P67936 TRIM51DP-201ENST00000529746 596 ntBASIC6.19□□□□□ -1.42
TPM4P67936 PCNAP4-201ENST00000532690 730 ntBASIC6.19□□□□□ -1.42
TPM4P67936 AC002519.2-203ENST00000567043 837 ntBASIC6.19□□□□□ -1.42
TPM4P67936 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.19□□□□□ -1.42
TPM4P67936 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.19□□□□□ -1.42
TPM4P67936 AC016839.1-201ENST00000578162 867 ntBASIC6.19□□□□□ -1.42
TPM4P67936 AC127024.5-201ENST00000580085 462 ntBASIC6.19□□□□□ -1.42
TPM4P67936 WBP1LP12-201ENST00000604449 331 ntBASIC6.19□□□□□ -1.42
TPM4P67936 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.19□□□□□ -1.42
TPM4P67936 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
TPM4P67936 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
TPM4P67936 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.19□□□□□ -1.42
TPM4P67936 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms