Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.51□□□□□ -1.37
YBX1P67809 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC6.51□□□□□ -1.37
YBX1P67809 AC009567.2-201ENST00000502989 349 ntBASIC6.51□□□□□ -1.37
YBX1P67809 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.51□□□□□ -1.37
YBX1P67809 AC008837.1-201ENST00000511513 412 ntBASIC6.51□□□□□ -1.37
YBX1P67809 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.51□□□□□ -1.37
YBX1P67809 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
YBX1P67809 AC011352.2-201ENST00000514574 1016 ntBASIC6.51□□□□□ -1.37
YBX1P67809 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC6.51□□□□□ -1.37
YBX1P67809 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.51□□□□□ -1.37
YBX1P67809 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.51□□□□□ -1.37
YBX1P67809 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC6.51□□□□□ -1.37
YBX1P67809 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.51□□□□□ -1.37
YBX1P67809 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
YBX1P67809 AC093524.1-201ENST00000564266 1094 ntBASIC6.51□□□□□ -1.37
YBX1P67809 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.51□□□□□ -1.37
YBX1P67809 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.51□□□□□ -1.37
YBX1P67809 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.51□□□□□ -1.37
YBX1P67809 AC005377.1-201ENST00000605126 456 ntBASIC6.51□□□□□ -1.37
YBX1P67809 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.51□□□□□ -1.37
YBX1P67809 AC009779.8-202ENST00000607990 932 ntBASIC6.51□□□□□ -1.37
YBX1P67809 AC097641.3-201ENST00000613523 464 ntBASIC6.51□□□□□ -1.37
YBX1P67809 AC025287.2-201ENST00000621911 668 ntBASIC6.51□□□□□ -1.37
YBX1P67809 AF246928.1-201ENST00000623768 87 ntBASIC6.51□□□□□ -1.37
YBX1P67809 AL357562.1-201ENST00000624911 609 ntBASIC6.51□□□□□ -1.37
YBX1P67809 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC6.51□□□□□ -1.37
YBX1P67809 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
YBX1P67809 AC034229.2-201ENST00000566945 2508 ntBASIC6.51□□□□□ -1.37
YBX1P67809 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.51□□□□□ -1.37
YBX1P67809 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.51□□□□□ -1.37
YBX1P67809 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.51□□□□□ -1.37
YBX1P67809 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC6.51□□□□□ -1.37
YBX1P67809 ZNF90P1-201ENST00000480493 1951 ntBASIC6.51□□□□□ -1.37
YBX1P67809 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
YBX1P67809 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.51□□□□□ -1.37
YBX1P67809 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.51□□□□□ -1.37
YBX1P67809 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 AC012213.2-201ENST00000562917 4597 ntBASIC6.5□□□□□ -1.37
YBX1P67809 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
YBX1P67809 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
YBX1P67809 HSPD1P11-201ENST00000508643 1702 ntBASIC6.5□□□□□ -1.37
YBX1P67809 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
YBX1P67809 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
YBX1P67809 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 CR381670.1-201ENST00000624291 1693 ntBASIC6.5□□□□□ -1.37
YBX1P67809 NCLP2-201ENST00000416078 1462 ntBASIC6.5□□□□□ -1.37
YBX1P67809 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.5□□□□□ -1.37
YBX1P67809 RNU6-697P-201ENST00000363348 107 ntBASIC6.5□□□□□ -1.37
YBX1P67809 RNU6-236P-201ENST00000363886 106 ntBASIC6.5□□□□□ -1.37
YBX1P67809 RNU4-51P-201ENST00000364206 140 ntBASIC6.5□□□□□ -1.37
YBX1P67809 RNA5SP474-201ENST00000391234 90 ntBASIC6.5□□□□□ -1.37
YBX1P67809 ARSFP1-201ENST00000398758 477 ntBASIC6.5□□□□□ -1.37
YBX1P67809 MIR541-201ENST00000401360 84 ntBASIC6.5□□□□□ -1.37
YBX1P67809 ZNF603P-201ENST00000405613 487 ntBASIC6.5□□□□□ -1.37
YBX1P67809 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC6.5□□□□□ -1.37
YBX1P67809 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 AL713922.1-201ENST00000416477 747 ntBASIC6.5□□□□□ -1.37
YBX1P67809 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.5□□□□□ -1.37
YBX1P67809 PTPN2P1-201ENST00000423212 1072 ntBASIC6.5□□□□□ -1.37
YBX1P67809 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.5□□□□□ -1.37
YBX1P67809 GTF2IP7-202ENST00000436677 309 ntBASIC6.5□□□□□ -1.37
YBX1P67809 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.5□□□□□ -1.37
YBX1P67809 PPIAP32-201ENST00000449940 472 ntBASIC6.5□□□□□ -1.37
YBX1P67809 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
YBX1P67809 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.5□□□□□ -1.37
YBX1P67809 AP005902.2-201ENST00000518393 307 ntBASIC6.5□□□□□ -1.37
YBX1P67809 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.5□□□□□ -1.37
YBX1P67809 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC6.5□□□□□ -1.37
YBX1P67809 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.5□□□□□ -1.37
YBX1P67809 AL121766.1-201ENST00000547436 487 ntBASIC6.5□□□□□ -1.37
YBX1P67809 CCNG2P1-201ENST00000549521 1000 ntBASIC6.5□□□□□ -1.37
YBX1P67809 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
YBX1P67809 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.5□□□□□ -1.37
YBX1P67809 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.5□□□□□ -1.37
YBX1P67809 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.5□□□□□ -1.37
YBX1P67809 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC6.5□□□□□ -1.37
YBX1P67809 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
YBX1P67809 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
YBX1P67809 AC021483.2-201ENST00000567415 758 ntBASIC6.5□□□□□ -1.37
YBX1P67809 AC002400.1-201ENST00000569310 726 ntBASIC6.5□□□□□ -1.37
YBX1P67809 MIR3915-201ENST00000578518 97 ntBASIC6.5□□□□□ -1.37
YBX1P67809 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.5□□□□□ -1.37
YBX1P67809 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC6.5□□□□□ -1.37
YBX1P67809 MIR3611-201ENST00000584484 83 ntBASIC6.5□□□□□ -1.37
YBX1P67809 AC107982.3-201ENST00000584957 985 ntBASIC6.5□□□□□ -1.37
YBX1P67809 AC073333.2-201ENST00000603589 769 ntBASIC6.5□□□□□ -1.37
YBX1P67809 AC073137.1-201ENST00000605636 634 ntBASIC6.5□□□□□ -1.37
YBX1P67809 BX323046.1-201ENST00000610145 535 ntBASIC6.5□□□□□ -1.37
YBX1P67809 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.5□□□□□ -1.37
YBX1P67809 AC073862.4-201ENST00000622982 854 ntBASIC6.5□□□□□ -1.37
YBX1P67809 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.5□□□□□ -1.37
YBX1P67809 AC124312.6-202ENST00000623624 418 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms