Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC095055.1-201ENST00000603472 1113 ntBASIC7.76□□□□□ -1.17
CLTCL1P53675 FAM25E-202ENST00000608562 189 ntBASIC7.76□□□□□ -1.17
CLTCL1P53675 AP003789.1-201ENST00000617737 605 ntBASIC7.76□□□□□ -1.17
CLTCL1P53675 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLTCL1P53675 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.76□□□□□ -1.17
CLTCL1P53675 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLTCL1P53675 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLTCL1P53675 AC016745.2-201ENST00000608834 3443 ntBASIC7.76□□□□□ -1.17
CLTCL1P53675 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CLTCL1P53675 MFSD8-216ENST00000641147 4009 ntBASIC7.76□□□□□ -1.17
CLTCL1P53675 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLTCL1P53675 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLTCL1P53675 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CLTCL1P53675 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.75□□□□□ -1.17
CLTCL1P53675 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CLTCL1P53675 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC7.75□□□□□ -1.17
CLTCL1P53675 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CLTCL1P53675 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.75□□□□□ -1.17
CLTCL1P53675 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.75□□□□□ -1.17
CLTCL1P53675 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.75□□□□□ -1.17
CLTCL1P53675 IGBP1P3-201ENST00000447449 1000 ntBASIC7.75□□□□□ -1.17
CLTCL1P53675 AL645937.3-201ENST00000453647 936 ntBASIC7.75□□□□□ -1.17
CLTCL1P53675 Z92846.1-201ENST00000456203 268 ntBASIC7.75□□□□□ -1.17
CLTCL1P53675 RN7SL423P-201ENST00000486202 304 ntBASIC7.75□□□□□ -1.17
CLTCL1P53675 AC134349.2-201ENST00000535136 910 ntBASIC7.75□□□□□ -1.17
CLTCL1P53675 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC7.75□□□□□ -1.17
CLTCL1P53675 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC7.75□□□□□ -1.17
CLTCL1P53675 AC073342.3-201ENST00000624211 193 ntBASIC7.75□□□□□ -1.17
CLTCL1P53675 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.75□□□□□ -1.17
CLTCL1P53675 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CLTCL1P53675 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.75□□□□□ -1.17
CLTCL1P53675 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CLTCL1P53675 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CLTCL1P53675 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
CLTCL1P53675 AC092747.4-201ENST00000620519 1861 ntBASIC7.75□□□□□ -1.17
CLTCL1P53675 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLTCL1P53675 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLTCL1P53675 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CLTCL1P53675 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC7.74□□□□□ -1.17
CLTCL1P53675 AC009784.1-201ENST00000426484 460 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.74□□□□□ -1.17
CLTCL1P53675 RPS3AP41-201ENST00000462701 778 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 AC092754.1-201ENST00000472975 479 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.74□□□□□ -1.17
CLTCL1P53675 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.74□□□□□ -1.17
CLTCL1P53675 YWHABP2-201ENST00000540201 713 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC7.74□□□□□ -1.17
CLTCL1P53675 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.74□□□□□ -1.17
CLTCL1P53675 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC7.74□□□□□ -1.17
CLTCL1P53675 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.74□□□□□ -1.17
CLTCL1P53675 MIR4646-201ENST00000580775 63 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC7.74□□□□□ -1.17
CLTCL1P53675 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC7.74□□□□□ -1.17
CLTCL1P53675 AC060766.1-201ENST00000590824 627 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.74□□□□□ -1.17
CLTCL1P53675 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
CLTCL1P53675 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC7.74□□□□□ -1.17
CLTCL1P53675 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLTCL1P53675 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLTCL1P53675 ZNF733P-202ENST00000444809 1573 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CLTCL1P53675 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC7.74□□□□□ -1.17
CLTCL1P53675 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CLTCL1P53675 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CLTCL1P53675 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
CLTCL1P53675 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.74□□□□□ -1.17
CLTCL1P53675 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CLTCL1P53675 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CLTCL1P53675 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC7.74□□□□□ -1.17
CLTCL1P53675 SNORA56-201ENST00000383966 129 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 TRY2P-201ENST00000448860 689 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
CLTCL1P53675 SNORD125-201ENST00000459538 96 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 AC083982.1-201ENST00000485679 344 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 AC105420.1-201ENST00000504389 582 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 AC018558.5-201ENST00000565840 952 ntBASIC7.74□□□□□ -1.17
CLTCL1P53675 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.74□□□□□ -1.17
CLTCL1P53675 GMFG-202ENST00000594700 397 ntTSL 2 BASIC7.74□□□□□ -1.17
CLTCL1P53675 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLTCL1P53675 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLTCL1P53675 AC232271.1-201ENST00000602455 2715 ntBASIC7.73□□□□□ -1.17
CLTCL1P53675 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLTCL1P53675 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
CLTCL1P53675 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.73□□□□□ -1.17
CLTCL1P53675 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLTCL1P53675 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLTCL1P53675 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
CLTCL1P53675 MIR105-1-201ENST00000385222 81 ntBASIC7.73□□□□□ -1.17
CLTCL1P53675 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.73□□□□□ -1.17
CLTCL1P53675 AC211486.3-201ENST00000412694 621 ntBASIC7.73□□□□□ -1.17
CLTCL1P53675 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLTCL1P53675 CEACAMP7-201ENST00000444105 496 ntBASIC7.73□□□□□ -1.17
CLTCL1P53675 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.73□□□□□ -1.17
CLTCL1P53675 OR4A43P-201ENST00000532938 908 ntBASIC7.73□□□□□ -1.17
CLTCL1P53675 MIR4691-201ENST00000583764 85 ntBASIC7.73□□□□□ -1.17
CLTCL1P53675 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
CLTCL1P53675 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.73□□□□□ -1.17
CLTCL1P53675 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLTCL1P53675 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
CLTCL1P53675 NBPF8-201ENST00000583271 5330 ntBASIC7.73□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms