Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.34□□□□□ -1.39
COPB1P53618 AL589655.1-201ENST00000405398 482 ntBASIC6.34□□□□□ -1.39
COPB1P53618 AL139039.2-201ENST00000407436 479 ntBASIC6.34□□□□□ -1.39
COPB1P53618 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.34□□□□□ -1.39
COPB1P53618 AL512504.1-201ENST00000415494 778 ntBASIC6.34□□□□□ -1.39
COPB1P53618 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC6.34□□□□□ -1.39
COPB1P53618 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.34□□□□□ -1.39
COPB1P53618 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.34□□□□□ -1.39
COPB1P53618 SFR1P2-201ENST00000421841 730 ntBASIC6.34□□□□□ -1.39
COPB1P53618 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.34□□□□□ -1.39
COPB1P53618 AL354692.1-201ENST00000423044 315 ntBASIC6.34□□□□□ -1.39
COPB1P53618 MTCYBP32-201ENST00000427945 1084 ntBASIC6.34□□□□□ -1.39
COPB1P53618 AC079807.1-201ENST00000429993 481 ntBASIC6.34□□□□□ -1.39
COPB1P53618 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.34□□□□□ -1.39
COPB1P53618 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPB1P53618 MTND2P40-201ENST00000436718 841 ntBASIC6.34□□□□□ -1.39
COPB1P53618 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.34□□□□□ -1.39
COPB1P53618 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.34□□□□□ -1.39
COPB1P53618 AC104339.1-201ENST00000465478 348 ntBASIC6.34□□□□□ -1.39
COPB1P53618 AC092865.4-201ENST00000477936 615 ntBASIC6.34□□□□□ -1.39
COPB1P53618 RN7SL362P-201ENST00000494228 267 ntBASIC6.34□□□□□ -1.39
COPB1P53618 ATG10-AS1-201ENST00000504846 648 ntBASIC6.34□□□□□ -1.39
COPB1P53618 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.34□□□□□ -1.39
COPB1P53618 GLUD1P3-202ENST00000508551 200 ntBASIC6.34□□□□□ -1.39
COPB1P53618 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.34□□□□□ -1.39
COPB1P53618 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.34□□□□□ -1.39
COPB1P53618 HMGN1P15-201ENST00000513870 295 ntBASIC6.34□□□□□ -1.39
COPB1P53618 AC097486.1-201ENST00000515331 210 ntBASIC6.34□□□□□ -1.39
COPB1P53618 RNU6-415P-201ENST00000516252 97 ntBASIC6.34□□□□□ -1.39
COPB1P53618 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.34□□□□□ -1.39
COPB1P53618 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.34□□□□□ -1.39
COPB1P53618 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPB1P53618 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.34□□□□□ -1.39
COPB1P53618 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.34□□□□□ -1.39
COPB1P53618 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.34□□□□□ -1.39
COPB1P53618 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.34□□□□□ -1.39
COPB1P53618 AC026826.3-201ENST00000561747 158 ntBASIC6.34□□□□□ -1.39
COPB1P53618 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.34□□□□□ -1.39
COPB1P53618 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.34□□□□□ -1.39
COPB1P53618 NANOGP3-201ENST00000605855 286 ntBASIC6.34□□□□□ -1.39
COPB1P53618 RNA5SP439-201ENST00000617595 124 ntBASIC6.34□□□□□ -1.39
COPB1P53618 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.34□□□□□ -1.39
COPB1P53618 AC090506.2-201ENST00000624521 419 ntBASIC6.34□□□□□ -1.39
COPB1P53618 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.34□□□□□ -1.39
COPB1P53618 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.34□□□□□ -1.39
COPB1P53618 AL137141.1-201ENST00000624622 4836 ntBASIC6.34□□□□□ -1.39
COPB1P53618 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COPB1P53618 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPB1P53618 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPB1P53618 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.34□□□□□ -1.39
COPB1P53618 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPB1P53618 AL592494.2-201ENST00000425455 1548 ntBASIC6.34□□□□□ -1.39
COPB1P53618 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COPB1P53618 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COPB1P53618 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.33□□□□□ -1.4
COPB1P53618 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
COPB1P53618 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COPB1P53618 AP000432.2-201ENST00000624164 2048 ntBASIC6.33□□□□□ -1.4
COPB1P53618 AL354854.1-201ENST00000455940 1363 ntBASIC6.33□□□□□ -1.4
COPB1P53618 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.33□□□□□ -1.4
COPB1P53618 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COPB1P53618 PARP4P2-201ENST00000446672 3326 ntBASIC6.33□□□□□ -1.4
COPB1P53618 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
COPB1P53618 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
COPB1P53618 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COPB1P53618 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COPB1P53618 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.33□□□□□ -1.4
COPB1P53618 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.33□□□□□ -1.4
COPB1P53618 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.33□□□□□ -1.4
COPB1P53618 RPL5P2-201ENST00000429598 854 ntBASIC6.33□□□□□ -1.4
COPB1P53618 GAPDHP48-201ENST00000436626 961 ntBASIC6.33□□□□□ -1.4
COPB1P53618 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.33□□□□□ -1.4
COPB1P53618 OR6C72P-201ENST00000451403 892 ntBASIC6.33□□□□□ -1.4
COPB1P53618 GEMIN2P1-201ENST00000454246 752 ntBASIC6.33□□□□□ -1.4
COPB1P53618 RN7SL254P-201ENST00000460609 284 ntBASIC6.33□□□□□ -1.4
COPB1P53618 AC119751.4-201ENST00000507498 357 ntBASIC6.33□□□□□ -1.4
COPB1P53618 AC025768.1-201ENST00000510057 267 ntBASIC6.33□□□□□ -1.4
COPB1P53618 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.33□□□□□ -1.4
COPB1P53618 MTATP6P9-201ENST00000515039 680 ntBASIC6.33□□□□□ -1.4
COPB1P53618 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.33□□□□□ -1.4
COPB1P53618 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.33□□□□□ -1.4
COPB1P53618 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.33□□□□□ -1.4
COPB1P53618 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.33□□□□□ -1.4
COPB1P53618 AP003102.1-201ENST00000525638 661 ntBASIC6.33□□□□□ -1.4
COPB1P53618 AC134349.2-201ENST00000535136 910 ntBASIC6.33□□□□□ -1.4
COPB1P53618 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.33□□□□□ -1.4
COPB1P53618 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.33□□□□□ -1.4
COPB1P53618 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.33□□□□□ -1.4
COPB1P53618 AC002310.3-201ENST00000569728 723 ntBASIC6.33□□□□□ -1.4
COPB1P53618 MTND1P8-201ENST00000571424 950 ntBASIC6.33□□□□□ -1.4
COPB1P53618 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
COPB1P53618 NPM1P45-201ENST00000583151 559 ntBASIC6.33□□□□□ -1.4
COPB1P53618 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC6.33□□□□□ -1.4
COPB1P53618 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.33□□□□□ -1.4
COPB1P53618 BNIP3P40-201ENST00000596017 556 ntBASIC6.33□□□□□ -1.4
COPB1P53618 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.33□□□□□ -1.4
COPB1P53618 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.33□□□□□ -1.4
COPB1P53618 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.33□□□□□ -1.4
COPB1P53618 MIR6809-201ENST00000612189 116 ntBASIC6.33□□□□□ -1.4
COPB1P53618 AC004801.6-201ENST00000616571 978 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms