Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RN7SL423P-201ENST00000486202 304 ntBASIC6.75□□□□□ -1.33
NUP98P52948 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NUP98P52948 AC005341.1-201ENST00000571086 708 ntBASIC6.75□□□□□ -1.33
NUP98P52948 AC060780.2-201ENST00000589047 198 ntBASIC6.75□□□□□ -1.33
NUP98P52948 AL589993.1-201ENST00000407450 2524 ntBASIC6.75□□□□□ -1.33
NUP98P52948 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUP98P52948 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUP98P52948 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NUP98P52948 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
NUP98P52948 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.75□□□□□ -1.33
NUP98P52948 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
NUP98P52948 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUP98P52948 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
NUP98P52948 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NUP98P52948 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.74□□□□□ -1.33
NUP98P52948 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.74□□□□□ -1.33
NUP98P52948 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUP98P52948 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC6.74□□□□□ -1.33
NUP98P52948 TRY2P-201ENST00000448860 689 ntBASIC6.74□□□□□ -1.33
NUP98P52948 AC105420.1-201ENST00000504389 582 ntBASIC6.74□□□□□ -1.33
NUP98P52948 RN7SKP66-201ENST00000516681 231 ntBASIC6.74□□□□□ -1.33
NUP98P52948 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.74□□□□□ -1.33
NUP98P52948 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC6.74□□□□□ -1.33
NUP98P52948 MIR4480-201ENST00000582492 71 ntBASIC6.74□□□□□ -1.33
NUP98P52948 AP005432.2-201ENST00000608162 586 ntBASIC6.74□□□□□ -1.33
NUP98P52948 MIR6748-201ENST00000610433 71 ntBASIC6.74□□□□□ -1.33
NUP98P52948 AC091905.4-201ENST00000623432 202 ntBASIC6.74□□□□□ -1.33
NUP98P52948 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.74□□□□□ -1.33
NUP98P52948 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.74□□□□□ -1.33
NUP98P52948 AC074101.1-201ENST00000637861 241 ntBASIC6.74□□□□□ -1.33
NUP98P52948 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
NUP98P52948 AL359715.3-201ENST00000569267 2123 ntBASIC6.74□□□□□ -1.33
NUP98P52948 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
NUP98P52948 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUP98P52948 AC232271.1-201ENST00000602455 2715 ntBASIC6.74□□□□□ -1.33
NUP98P52948 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
NUP98P52948 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
NUP98P52948 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
NUP98P52948 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.74□□□□□ -1.33
NUP98P52948 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.74□□□□□ -1.33
NUP98P52948 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUP98P52948 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUP98P52948 RNU4-2-201ENST00000365668 141 ntBASIC6.73□□□□□ -1.33
NUP98P52948 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.73□□□□□ -1.33
NUP98P52948 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NUP98P52948 AC109464.1-201ENST00000511091 819 ntBASIC6.73□□□□□ -1.33
NUP98P52948 AC122688.1-201ENST00000541494 223 ntBASIC6.73□□□□□ -1.33
NUP98P52948 AC100827.5-201ENST00000615883 426 ntBASIC6.73□□□□□ -1.33
NUP98P52948 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
NUP98P52948 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.73□□□□□ -1.33
NUP98P52948 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUP98P52948 AC002090.1-201ENST00000625000 2138 ntBASIC6.73□□□□□ -1.33
NUP98P52948 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.73□□□□□ -1.33
NUP98P52948 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUP98P52948 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.73□□□□□ -1.33
NUP98P52948 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
NUP98P52948 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.73□□□□□ -1.33
NUP98P52948 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
NUP98P52948 ZNF733P-202ENST00000444809 1573 ntBASIC6.73□□□□□ -1.33
NUP98P52948 MFSD8-216ENST00000641147 4009 ntBASIC6.73□□□□□ -1.33
NUP98P52948 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUP98P52948 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
NUP98P52948 SNORA56-201ENST00000383966 129 ntBASIC6.73□□□□□ -1.33
NUP98P52948 MIR105-1-201ENST00000385222 81 ntBASIC6.73□□□□□ -1.33
NUP98P52948 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.73□□□□□ -1.33
NUP98P52948 AL139128.1-201ENST00000413921 941 ntBASIC6.73□□□□□ -1.33
NUP98P52948 LINC02210-201ENST00000444561 288 ntBASIC6.73□□□□□ -1.33
NUP98P52948 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.73□□□□□ -1.33
NUP98P52948 AC092324.1-201ENST00000468671 324 ntBASIC6.73□□□□□ -1.33
NUP98P52948 AC083982.1-201ENST00000485679 344 ntBASIC6.73□□□□□ -1.33
NUP98P52948 SCARNA20.4-201ENST00000516969 131 ntBASIC6.73□□□□□ -1.33
NUP98P52948 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.73□□□□□ -1.33
NUP98P52948 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.73□□□□□ -1.33
NUP98P52948 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.73□□□□□ -1.33
NUP98P52948 AP003789.1-201ENST00000617737 605 ntBASIC6.73□□□□□ -1.33
NUP98P52948 AC015660.5-201ENST00000623238 564 ntBASIC6.73□□□□□ -1.33
NUP98P52948 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.73□□□□□ -1.33
NUP98P52948 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.73□□□□□ -1.33
NUP98P52948 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.73□□□□□ -1.33
NUP98P52948 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
NUP98P52948 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUP98P52948 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
NUP98P52948 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUP98P52948 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
NUP98P52948 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.72□□□□□ -1.33
NUP98P52948 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.72□□□□□ -1.33
NUP98P52948 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.72□□□□□ -1.33
NUP98P52948 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.72□□□□□ -1.33
NUP98P52948 RNF10P1-201ENST00000418589 369 ntBASIC6.72□□□□□ -1.33
NUP98P52948 RPL34P20-201ENST00000442771 351 ntBASIC6.72□□□□□ -1.33
NUP98P52948 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.72□□□□□ -1.33
NUP98P52948 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.72□□□□□ -1.33
NUP98P52948 YWHABP2-201ENST00000540201 713 ntBASIC6.72□□□□□ -1.33
NUP98P52948 AP002373.2-201ENST00000541631 1060 ntBASIC6.72□□□□□ -1.33
NUP98P52948 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.72□□□□□ -1.33
NUP98P52948 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.72□□□□□ -1.33
NUP98P52948 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUP98P52948 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
NUP98P52948 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
NUP98P52948 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms