Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.16□□□□□ -1.26
LIG3P49916 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG3P49916 RN7SL88P-201ENST00000480166 299 ntBASIC7.16□□□□□ -1.26
LIG3P49916 RPL10P7-201ENST00000495649 625 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AC084024.2-201ENST00000503480 791 ntBASIC7.16□□□□□ -1.26
LIG3P49916 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC7.16□□□□□ -1.26
LIG3P49916 CFI-204ENST00000510800 667 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG3P49916 LINC01085-203ENST00000511195 326 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AC114940.1-201ENST00000512162 1265 ntBASIC7.16□□□□□ -1.26
LIG3P49916 PGAM4P2-201ENST00000512491 721 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC7.16□□□□□ -1.26
LIG3P49916 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG3P49916 RFPL4AP3-201ENST00000515267 345 ntBASIC7.16□□□□□ -1.26
LIG3P49916 RNU6-1308P-201ENST00000516817 103 ntBASIC7.16□□□□□ -1.26
LIG3P49916 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.16□□□□□ -1.26
LIG3P49916 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG3P49916 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 AC016144.1-201ENST00000548175 1087 ntBASIC7.16□□□□□ -1.26
LIG3P49916 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG3P49916 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG3P49916 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG3P49916 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 AC126323.4-201ENST00000566935 234 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AC095057.3-201ENST00000567102 1157 ntBASIC7.16□□□□□ -1.26
LIG3P49916 MIR5708-201ENST00000579723 85 ntBASIC7.16□□□□□ -1.26
LIG3P49916 VN1R90P-201ENST00000595717 726 ntBASIC7.16□□□□□ -1.26
LIG3P49916 TEX41-218ENST00000596540 882 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 PRR13P5-201ENST00000596581 442 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AL355333.1-201ENST00000605632 279 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AC092653.1-201ENST00000608509 531 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 AL158063.1-201ENST00000615349 536 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.16□□□□□ -1.26
LIG3P49916 VN1R7P-201ENST00000619242 903 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AL359757.1-201ENST00000623176 255 ntBASIC7.16□□□□□ -1.26
LIG3P49916 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
LIG3P49916 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LIG3P49916 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.15□□□□□ -1.26
LIG3P49916 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
LIG3P49916 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LIG3P49916 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LIG3P49916 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG3P49916 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG3P49916 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC7.15□□□□□ -1.26
LIG3P49916 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LIG3P49916 RNA5SP429-201ENST00000363688 109 ntBASIC7.15□□□□□ -1.26
LIG3P49916 RNA5SP114-201ENST00000363780 113 ntBASIC7.15□□□□□ -1.26
LIG3P49916 Y_RNA.192-201ENST00000363977 102 ntBASIC7.15□□□□□ -1.26
LIG3P49916 snoZ40.1-201ENST00000364540 72 ntBASIC7.15□□□□□ -1.26
LIG3P49916 RNU12-2P-201ENST00000364789 156 ntBASIC7.15□□□□□ -1.26
LIG3P49916 RNU4-31P-201ENST00000384211 141 ntBASIC7.15□□□□□ -1.26
LIG3P49916 ZNF37CP-201ENST00000406795 241 ntBASIC7.15□□□□□ -1.26
LIG3P49916 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG3P49916 RN7SKP137-201ENST00000411074 307 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AF274854.1-201ENST00000413236 615 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG3P49916 OR5BE1P-201ENST00000425977 939 ntBASIC7.15□□□□□ -1.26
LIG3P49916 Z68868.1-201ENST00000429048 544 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AC124944.2-201ENST00000429866 1242 ntBASIC7.15□□□□□ -1.26
LIG3P49916 C8orf59P1-201ENST00000429930 303 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AC244035.1-201ENST00000430042 390 ntBASIC7.15□□□□□ -1.26
LIG3P49916 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LIG3P49916 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
LIG3P49916 MTND2P40-201ENST00000436718 841 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG3P49916 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG3P49916 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG3P49916 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG3P49916 SRP68P2-201ENST00000456184 254 ntBASIC7.15□□□□□ -1.26
LIG3P49916 RN7SKP198-201ENST00000459286 306 ntBASIC7.15□□□□□ -1.26
LIG3P49916 RPS4XP23-201ENST00000487801 237 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AC092045.1-201ENST00000495716 1231 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AC008885.2-201ENST00000509506 930 ntBASIC7.15□□□□□ -1.26
LIG3P49916 BTG4P1-201ENST00000510421 183 ntBASIC7.15□□□□□ -1.26
LIG3P49916 PRELID3BP4-201ENST00000515476 571 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AC105185.1-201ENST00000518705 535 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AC134698.4-201ENST00000523451 826 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG3P49916 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LIG3P49916 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG3P49916 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG3P49916 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG3P49916 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
LIG3P49916 AL121766.1-201ENST00000547436 487 ntBASIC7.15□□□□□ -1.26
LIG3P49916 OR11H3P-201ENST00000554547 982 ntBASIC7.15□□□□□ -1.26
LIG3P49916 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG3P49916 AC091932.1-201ENST00000569381 427 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AC010546.1-201ENST00000569391 485 ntBASIC7.15□□□□□ -1.26
LIG3P49916 MIR3915-201ENST00000578518 97 ntBASIC7.15□□□□□ -1.26
LIG3P49916 MIR378H-201ENST00000579966 83 ntBASIC7.15□□□□□ -1.26
LIG3P49916 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.15□□□□□ -1.26
LIG3P49916 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC7.15□□□□□ -1.26
LIG3P49916 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms