Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
HMGCLP35914 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
HMGCLP35914 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCLP35914 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.64□□□□□ -1.51
HMGCLP35914 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCLP35914 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.64□□□□□ -1.51
HMGCLP35914 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCLP35914 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HMGCLP35914 MTCO1P7-201ENST00000419523 1542 ntBASIC5.64□□□□□ -1.51
HMGCLP35914 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HMGCLP35914 RNF19BPY-201ENST00000458209 1550 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HMGCLP35914 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
HMGCLP35914 AC068870.3-201ENST00000625077 2536 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 GAPDHP24-201ENST00000328713 983 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 AL121886.1-201ENST00000358609 435 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGCLP35914 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGCLP35914 AC087752.1-201ENST00000391360 558 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
HMGCLP35914 GAPDHP42-201ENST00000406848 981 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 RMRPP5-201ENST00000411156 267 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 AC096921.1-201ENST00000411661 375 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 OR2AT2P-201ENST00000413438 905 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGCLP35914 NANOGP9-201ENST00000439890 892 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 AC064862.4-201ENST00000442180 334 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGCLP35914 AL596266.1-201ENST00000448132 400 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 RPL31P15-201ENST00000449770 338 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGCLP35914 RPL12P24-201ENST00000474907 486 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGCLP35914 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.63□□□□□ -1.51
HMGCLP35914 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
HMGCLP35914 AC135626.1-201ENST00000556983 435 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 AC105036.1-201ENST00000566222 271 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGCLP35914 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGCLP35914 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGCLP35914 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGCLP35914 AC127024.6-201ENST00000621598 424 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGCLP35914 AC092451.3-201ENST00000625067 1343 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
HMGCLP35914 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 OR4F13P-202ENST00000560066 2054 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 AC109446.4-201ENST00000623235 2755 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 AC004158.1-201ENST00000564508 4319 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 LINC01963-201ENST00000562038 3148 ntBASIC5.63□□□□□ -1.51
HMGCLP35914 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGCLP35914 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCLP35914 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.63□□□□□ -1.51
HMGCLP35914 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGCLP35914 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HMGCLP35914 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 AL031985.1-201ENST00000392713 418 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGCLP35914 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HMGCLP35914 AC006335.2-201ENST00000437993 330 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 AC002504.1-201ENST00000438281 691 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 AL450996.1-201ENST00000445574 1202 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HMGCLP35914 NXT1P1-201ENST00000458481 316 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGCLP35914 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 RPS17P5-201ENST00000498293 408 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 SUMO2P4-201ENST00000504193 276 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 GLUD1P3-202ENST00000508551 200 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGCLP35914 RN7SKP253-201ENST00000516424 309 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 NRBF2P4-201ENST00000520874 850 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGCLP35914 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCLP35914 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGCLP35914 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGCLP35914 MIR3614-201ENST00000581261 86 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 MIR4310-201ENST00000582950 57 ntBASIC5.62□□□□□ -1.51
HMGCLP35914 AC015712.7-201ENST00000615211 635 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 244.5 ms