Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.47□□□□□ -1.37
CIITAP33076 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CIITAP33076 RNA5SP122-201ENST00000384457 108 ntBASIC6.47□□□□□ -1.37
CIITAP33076 RPL7P58-201ENST00000402913 758 ntBASIC6.47□□□□□ -1.37
CIITAP33076 MTND4LP21-201ENST00000415303 295 ntBASIC6.47□□□□□ -1.37
CIITAP33076 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CIITAP33076 Z84478.1-201ENST00000438230 1219 ntBASIC6.47□□□□□ -1.37
CIITAP33076 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.47□□□□□ -1.37
CIITAP33076 RPL36AP39-201ENST00000445859 318 ntBASIC6.47□□□□□ -1.37
CIITAP33076 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CIITAP33076 SETP20-201ENST00000457046 852 ntBASIC6.47□□□□□ -1.37
CIITAP33076 RPS23P2-201ENST00000463671 415 ntBASIC6.47□□□□□ -1.37
CIITAP33076 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.47□□□□□ -1.37
CIITAP33076 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.47□□□□□ -1.37
CIITAP33076 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.47□□□□□ -1.37
CIITAP33076 RNU6-467P-201ENST00000517027 110 ntBASIC6.47□□□□□ -1.37
CIITAP33076 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC6.47□□□□□ -1.37
CIITAP33076 OR4A6P-201ENST00000534364 970 ntBASIC6.47□□□□□ -1.37
CIITAP33076 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.47□□□□□ -1.37
CIITAP33076 AC090079.2-201ENST00000575289 768 ntBASIC6.47□□□□□ -1.37
CIITAP33076 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
CIITAP33076 AC005229.3-201ENST00000603438 323 ntBASIC6.47□□□□□ -1.37
CIITAP33076 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.47□□□□□ -1.37
CIITAP33076 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.47□□□□□ -1.37
CIITAP33076 AC090607.5-201ENST00000615692 224 ntBASIC6.47□□□□□ -1.37
CIITAP33076 AL035661.1-201ENST00000620459 1144 ntBASIC6.47□□□□□ -1.37
CIITAP33076 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.47□□□□□ -1.37
CIITAP33076 CU639417.4-201ENST00000623928 207 ntBASIC6.47□□□□□ -1.37
CIITAP33076 AC020656.2-201ENST00000613291 5309 ntBASIC6.47□□□□□ -1.37
CIITAP33076 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.47□□□□□ -1.37
CIITAP33076 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CIITAP33076 MRE11P1-201ENST00000464884 2127 ntBASIC6.47□□□□□ -1.37
CIITAP33076 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CIITAP33076 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CIITAP33076 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.37
CIITAP33076 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
CIITAP33076 AL137141.1-201ENST00000624622 4836 ntBASIC6.46□□□□□ -1.37
CIITAP33076 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CIITAP33076 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CIITAP33076 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CIITAP33076 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CIITAP33076 AL136116.2-201ENST00000404020 785 ntBASIC6.46□□□□□ -1.38
CIITAP33076 RN7SKP293-201ENST00000411389 296 ntBASIC6.46□□□□□ -1.38
CIITAP33076 AC113412.1-201ENST00000425840 504 ntBASIC6.46□□□□□ -1.38
CIITAP33076 NAP1L4P2-201ENST00000425958 899 ntBASIC6.46□□□□□ -1.38
CIITAP33076 EIF2S2P3-201ENST00000428356 999 ntBASIC6.46□□□□□ -1.38
CIITAP33076 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.46□□□□□ -1.38
CIITAP33076 BX679664.2-201ENST00000439282 283 ntBASIC6.46□□□□□ -1.38
CIITAP33076 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.46□□□□□ -1.38
CIITAP33076 DUTP1-201ENST00000493631 470 ntBASIC6.46□□□□□ -1.38
CIITAP33076 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CIITAP33076 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.46□□□□□ -1.38
CIITAP33076 AC074087.1-201ENST00000512059 724 ntBASIC6.46□□□□□ -1.38
CIITAP33076 RN7SKP67-201ENST00000515905 235 ntBASIC6.46□□□□□ -1.38
CIITAP33076 IGLVIV-64-201ENST00000518581 301 ntBASIC6.46□□□□□ -1.38
CIITAP33076 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.46□□□□□ -1.38
CIITAP33076 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.46□□□□□ -1.38
CIITAP33076 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.46□□□□□ -1.38
CIITAP33076 AP000919.1-201ENST00000582850 985 ntBASIC6.46□□□□□ -1.38
CIITAP33076 ADAD1P2-201ENST00000588476 646 ntBASIC6.46□□□□□ -1.38
CIITAP33076 HIRAP1-201ENST00000605318 787 ntBASIC6.46□□□□□ -1.38
CIITAP33076 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.46□□□□□ -1.38
CIITAP33076 RN7SL787P-201ENST00000613000 284 ntBASIC6.46□□□□□ -1.38
CIITAP33076 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.46□□□□□ -1.38
CIITAP33076 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CIITAP33076 AC020978.9-201ENST00000624380 1141 ntBASIC6.46□□□□□ -1.38
CIITAP33076 AL356094.1-201ENST00000624663 1212 ntBASIC6.46□□□□□ -1.38
CIITAP33076 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CIITAP33076 SRRM1P3-201ENST00000426911 2678 ntBASIC6.46□□□□□ -1.38
CIITAP33076 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CIITAP33076 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.46□□□□□ -1.38
CIITAP33076 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.46□□□□□ -1.38
CIITAP33076 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CIITAP33076 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CIITAP33076 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CIITAP33076 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CIITAP33076 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.46□□□□□ -1.38
CIITAP33076 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
CIITAP33076 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CIITAP33076 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CIITAP33076 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CIITAP33076 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CIITAP33076 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CIITAP33076 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CIITAP33076 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CIITAP33076 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.45□□□□□ -1.38
CIITAP33076 AC087752.1-201ENST00000391360 558 ntBASIC6.45□□□□□ -1.38
CIITAP33076 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.45□□□□□ -1.38
CIITAP33076 AL512422.1-201ENST00000407033 553 ntBASIC6.45□□□□□ -1.38
CIITAP33076 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.45□□□□□ -1.38
CIITAP33076 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.45□□□□□ -1.38
CIITAP33076 OR52Y1P-201ENST00000452418 828 ntBASIC6.45□□□□□ -1.38
CIITAP33076 RPL12P39-201ENST00000455456 496 ntBASIC6.45□□□□□ -1.38
CIITAP33076 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CIITAP33076 AC087672.1-201ENST00000479876 766 ntBASIC6.45□□□□□ -1.38
CIITAP33076 AL133372.1-201ENST00000493565 745 ntBASIC6.45□□□□□ -1.38
CIITAP33076 AP001960.1-201ENST00000506494 658 ntBASIC6.45□□□□□ -1.38
CIITAP33076 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.45□□□□□ -1.38
CIITAP33076 AC113398.2-201ENST00000507630 558 ntBASIC6.45□□□□□ -1.38
CIITAP33076 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms