Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 AC084033.1-201ENST00000550830 633 ntBASIC5.84□□□□□ -1.47
HLA-DPA1P20036 COX6CP7-201ENST00000597056 208 ntBASIC5.84□□□□□ -1.47
HLA-DPA1P20036 FAM27E4-201ENST00000605259 342 ntBASIC5.84□□□□□ -1.47
HLA-DPA1P20036 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HLA-DPA1P20036 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.84□□□□□ -1.48
HLA-DPA1P20036 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HLA-DPA1P20036 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HLA-DPA1P20036 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HLA-DPA1P20036 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 TMSB4XP2-201ENST00000335179 210 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 RNA5SP91-201ENST00000390902 119 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 SNORA11.3-201ENST00000408471 128 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 HMGN1P20-201ENST00000411849 300 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 METTL15P3-201ENST00000415522 1221 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 RNGTTP1-201ENST00000420965 728 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC021876.1-201ENST00000425959 359 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC079807.1-201ENST00000429993 481 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 MEMO1P4-201ENST00000453590 386 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 RPL12P39-201ENST00000455456 496 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 SEPT7P6-201ENST00000469999 1143 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC128716.1-201ENST00000475129 166 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AP000859.1-201ENST00000525536 307 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC108865.2-201ENST00000606881 432 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 SNORA11.6-201ENST00000619030 128 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC074140.1-201ENST00000621617 208 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AL359955.1-201ENST00000455242 3275 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 MTCO1P15-201ENST00000529569 1526 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AL031595.2-201ENST00000624215 19071 ntBASIC5.83□□□□□ -1.48
HLA-DPA1P20036 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.83□□□□□ -1.48
HLA-DPA1P20036 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AC068870.3-201ENST00000625077 2536 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AL357752.1-201ENST00000412817 349 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 MRPL53P1-201ENST00000414323 319 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 PCBP2P1-201ENST00000437262 977 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 RPL12P11-201ENST00000439970 501 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AC144530.1-201ENST00000452862 555 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 OR7L1P-201ENST00000456181 380 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 RPS17P15-201ENST00000475609 349 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AC006499.4-201ENST00000510947 694 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 SNORA81.2-201ENST00000516868 170 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AC068305.2-201ENST00000550567 1205 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 SNORD39.2-201ENST00000579995 76 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 MIR4310-201ENST00000582950 57 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 HIRAP1-201ENST00000605318 787 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AC015982.1-201ENST00000608113 465 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms